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PATH-53. IMMUNOLOGICAL PROFILING OF MUTATIONAL AND TRANSCRIPTIONAL SUBGROUPS IN PEDIATRIC AND ADULT HIGH-GRADE GLIOMAS

机译:路径-53。儿科和成人高级胶质瘤中突变和转录亚组的免疫仿生

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摘要

Immunological treatment strategies, including checkpoint inhibition, are currently under investigation for high-grade gliomas, but their success is limited. Hence, it is crucial to determine immunological pathways that can be targeted and to identify subgroups of patients likely to benefit from immunotherapies. Previous studies are still limited by comparably small sample sizes and there is only few data about specific immunological mechanisms in pediatric high-grade glioma. We gathered published gene expression data from 1135 adult and pediatric high-grade gliomas and applied a machine learning technique to determine their mutational (K27, G34, IDHmut, IDHwt) and transcriptional subtype. Subsequently, immune cell infiltration and functional immune pathway signatures were evaluated in correlation to histological diagnosis, age, transcriptional and mutational subtype. T-SNE analysis and unsupervised hierarchical clustering was applied to detect subgroup-specific immune microenvironments across all high-grade glioma subtypes. Four distinct microenvironmental phenotypes of immune cell infiltration were identified, which can be stratified into vascular, monocytic/stromal, monocytic/T-cell and APC/NK/T-cell dominant immune clusters. Immune cell infiltration correlated strongly with transcriptional and mutational subtypes but was independent of age and histological diagnosis (p< 0.01). H3F3A mutated tumors had significantly fewer tumor infiltrating lymphocytes and macrophages. By including functional pathways and correlating the expression of immunostimulatory and inhibitory receptor/ligand interactions, we were able to define the immunological microenvironment and to identify possible immunological subtypes associated with poor prognosis as well as subtypes that might be especially amenable to checkpoint inhibition. In addition, comparisons of overall survival with the immunological microenvironment and specifically with immune checkpoint molecules revealed diverse correlations within the transcriptional and mutational subgroups. In conclusion, we shat that mutational and transcriptional subgroups of pediatric and adult high-grade gliomas are characterized by distinct immunological tumor microenvironments. Our analysis demonstrates the immunological heterogeneity within this entity and emphasizes an immune specific stratification of subgroups for upcoming immunotherapy trials.
机译:目前正在调查免疫治疗策略,包括检查点抑制,对高级胶质瘤进行调查,但它们的成功是有限的。因此,确定可以靶向的免疫途径并鉴定可能从免疫治疗中受益的患者的亚组是至关重要的。以前的研究仍然限制了比较小的样本尺寸,并且仅少数关于小儿高级胶质瘤的特定免疫机制的数据。我们收集了来自1135名成人和儿科高级胶质瘤的出版了基因表达数据,并应用了机器学习技术,以确定其突变(K27,G34,IDHMUT,IDHWT)和转录亚型。随后,评价免疫细胞浸润和功能性免疫途径签发与组织学诊断,年龄,转录和突变亚型相关。施用T-SNE分析和无监督的分层聚类以检测所有高级胶质瘤亚型的亚组特异性免疫微环境。鉴定了四种不同的显微性环境的免疫细胞浸润表型,其可以分层成血管,单核细胞/基质,单核细胞/ T细胞和APC / NK / T细胞显性免疫簇。免疫细胞浸润与转录和突变亚型强烈相关,但与年龄和组织学诊断无关(P <0.01)。 H3F3A突变的肿瘤明显较少肿瘤浸润淋巴细胞和巨噬细胞。通过包括功能性途径和关联免疫刺激和抑制剂/配体相互作用的表达,我们能够确定免疫学微环境,并鉴定与预后差的可能免疫亚型以及可能特别适合检查点抑制的亚型。此外,与免疫微环境的总体生存率和特别是免疫检查点分子的总体生存率揭示了转录和突变亚组内的不同相关性。总之,我们SHAT突变和成人高级胶质瘤的突变和转录亚组是具有不同免疫肿瘤微环境的特征。我们的分析显示了该实体内的免疫异质性,并强调了即将到来的免疫疗法试验的亚组的免疫特异性分层。

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