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Importance of the Conserved Residues in the Peptidoglycan Glycosyltransferase Module of the Class A Penicillin-binding Protein 1b of Escherichia coli

机译:肽聚糖中保守残基的重要性 甲型青霉素结合蛋白1b的糖基转移酶模块 埃希氏菌属 大肠杆菌

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摘要

The peptidoglycan glycosyltransferase (GT) module of class A penicillin-binding proteins (PBPs) and monofunctional GTs catalyze glycan chain elongation of the bacterial cell wall. These enzymes belong to the GT51 family, are characterized by five conserved motifs, and have some fold similarity with the phage λ lysozyme. In this work, we have systematically modified all the conserved amino acid residues of the GT module of Escherichia coli class A PBP1b by site-directed mutagenesis and determined their importance for the in vivo and in vitro activity and the thermostability of the protein. To get an insight into the GT active site of this paradigm enzyme, a model of PBP1b GT domain was constructed based on the available crystal structures (PDB codes 2OLV and 2OLU). The data show that in addition to the essential glutamate residues Glu233 of motif 1 and Glu290 of motif 3, the residues Phe237 and His240 of motif 1 and Gly264, Thr267, Gln271, and Lys274 of motif 2, all located in the catalytic cavity of the GT domain, are essential for the in vitro enzymatic activity of the PBP1b and for its in vivo functioning. Thus, the first three conserved motifs contain most of the residues that are required for the GT activity of the PBP1b. The residues Asp234, Phe237, His240, Thr267, and Gln271 are proposed to maintain the structure of the active site and the positioning of the catalytic Glu233.
机译:A类青霉素结合蛋白(PBP)的肽聚糖糖基转移酶(GT)模块和单功能GT催化细菌细胞壁的聚糖链延长。这些酶属于GT51家族,以五个保守的基序为特征,与噬菌体λ溶菌酶具有相似的折叠相似性。在这项工作中,我们已经通过定点诱变系统地修饰了大肠杆菌A类PBP1b的GT模块的所有保守氨基酸残基,并确定了它们对于蛋白质的体内和体外活性以及热稳定性的重要性。为了深入了解此范例酶的GT活性位点,基于可用的晶体结构(PDB代码2OLV和2OLU)构建了PBP1b GT域模型。数据显示,除了基序1的必需谷氨酸残基Glu 233 和基序3的Glu 290 ,残基Phe 237 和His主题1的 240 和Gly 264 ,Thr 267 ,Gln 271 和Lys 274 234 ,Phe 237 ,His 240 ,Thr 267 , 提出了Gln 271 来保持活性物质的结构 Glu 233 的位置和位置

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