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Two Rare Pathogenic HBB Variants in a Patient with β-Thalassemia Intermedia

机译:β-地中海贫血患者的两个罕见病原性HBB变异

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摘要

The β-thalassemias are a group of hereditary disorders with autosomal recessive inheritance characterized by the presence of defective synthesis of the β-globin chain, an integral component of the hemoglobin molecule, resulting in either partial synthesis (β ) or complete absence (β ) [ ]. The disease reaches a high frequency in the Mediterranean Basin, Africa, the Middle East, the Indian subcontinent, and Southeast Asia [ ]. According to the World Health Organization, the frequency of abnormal hemoglobin is 7% globally [ ]. β-Thalassemia major is characterized by completely inhibited synthesis of beta chains [ ], and so it must be treated, generally by transfusion therapy [ ]. The β-thalassemia major phenotype has homozygotes or compound heterozygotes for β  or β  genes. Generally, mutations targeting the coding regions of the gene and conservative regions on the exon-intron boundary lead to β -thalassemia, and mutations in regions that do not encode β -thalassemia. In contrast to the major type, the presence of one normal gene in heterozygotes usually leads to enough normal β-globin chain synthesis so that the affected individuals are usually asymptomatic with only hypochromic and microcytic red blood cells. This condition is referred to as β-thalassemia minor [ ]. β-Thalassemia intermedia clinically differs from the major and minor ones with respect to the necessity of transfusion. The degree of anemia for β-thalassemia major is more aggravated than that for β-thalassemia intermedia. The genotype of β-thalassemia intermedia is mostly homozygous or compound heterozygous [ ]. A 14-year-old male Iraqi patient with Turkish origins presented with infection, mild hepatomegaly, and loss of appetite. Laboratory findings were as follows: white blood cell count, 13.53x10 /L; red blood cell count, 3.84x10 /L; platelet count, 367x10 /L; hemoglobin, 7.7 g/dL; hematocrit, 26.3%; mean corpuscular hemoglobin, 22.7 pg; and mean corpuscular volume, 68.5 fL. The patient had no transfusion history. Written informed consent was obtained. A peripheral blood sample was collected in an EDTA-containing tube. Genomic DNA was extracted from the white blood cells. The   gene was amplified as 2 polymerase chain reaction (PCR) fragments (from the -101 position to the Poly-A signal) using 40 ng of genomic DNA in reaction volumes of 25 µL. After PCR amplification, sequencing was performed using the BigDye Terminator v3.1 Cycle Sequencing Kit. The patient had heterozygous c.251delG (p.Gly84fs, rs193922555, β ) and heterozygous c.316-3 C>A (IVSII-848 C>A, rs33913413, β ) pathologic variants, as shown in . Sequencing analysis showed that the father had heterozygous c.251delG and the mother had heterozygous c.316-3 C>A variants. The global frequency of c.251delG and c.316-3 C>A is unknown and 0.00002%, respectively [ ]. c.316-3 C>A is observed at a frequency of 0.4% in Turkey [ ] and 2.9% in Iraq [ ]. c.251delG is observed at 0.2% in Turkey [ ] and 10.1% in northern Iraq [ ].
机译:β地中海贫血是一类遗传性疾病,具有常染色体隐性遗传,其特征在于存在β珠蛋白链(血红蛋白分子的组成部分)合成不良,导致部分合成(β)或完全缺失(β) []。该病在地中海盆地,非洲,中东,印度次大陆和东南亚地区发病率很高。根据世界卫生组织的数据,全球异常血红蛋白的发生率全球为7%[]。严重的地中海贫血的特点是完全抑制了β链的合成[],因此必须通过输血疗法对其进行治疗[]。 β地中海贫血的主要表型具有针对β或β基因的纯合子或复合杂合子。通常,靶向基因的编码区和外显子-内含子边界上保守区的突变导致β地中海贫血,而在不编码β地中海贫血的区域突变。与主要类型相反,杂合子中存在一个正常基因通常会导致足够的正常β珠蛋白链合成,因此受影响的个体通常无症状,仅存在低色素和微细胞红细胞。这种情况称为轻度β地中海贫血[]。就输血的必要性而言,中度β-地中海贫血在临床上与主要和次要地中海贫血不同。严重的β-地中海贫血的贫血程度比中间的β-地中海贫血更为严重。 β-地中海贫血的中间基因型多为纯合子或复合杂合子[]。一名来自土耳其的14岁伊拉克籍男性患者出现感染,轻度肝肿大和食欲不振。实验室检查结果如下:白细胞计数13.53x10 / L;红细胞计数3.84x10 / L;血小板计数367x10 / L;血红蛋白7.7 g / dL;血细胞比容26.3%;平均红细胞血红蛋白22.7 pg;平均红细胞体积为68.5 fL。该患者无输血史。已获得书面知情同意书。在含有EDTA的试管中收集外周血样品。从白细胞提取基因组DNA。使用40 ng基因组DNA在25 µL反应体积中,将基因扩增为2个聚合酶链反应(PCR)片段(从-101位置到Poly-A信号)。 PCR扩增后,使用BigDye Terminator v3.1循环测序试剂盒进行测序。该患者具有杂合子c.251delG(p.Gly84fs,rs193922555,β)和杂合子c.316-3 C> A(IVSII-848 C> A,rs33913413,β)病理变异,如图所示。测序分析表明,父亲具有杂合子c.251delG,母亲具有杂合子c.316-3 C> A变异。 c.251delG和c.316-3 C> A的全局频率分别是未知的和0.00002%[]。在土耳其[]中观察到c.316-3 C> A的频率为0.4%,在伊拉克[]中观察到的频率为2.9%。在土耳其[]中观察到c.251delG的比例为0.2%,在伊拉克北部[]中的比例为10.1%。

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