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Shiga-Toxigenic Escherichia coli Detection in Stool Samples Screened for Viral Gastroenteritis in Alberta Canada

机译:在加拿大艾伯塔省筛查的病毒性肠胃炎粪便样本中检测到志贺毒素毒素大肠埃希菌

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摘要

Shiga-toxigenic Escherichia coli (STEC) is an important cause of diarrheal disease. The most notorious STEC serotype is O157:H7, which is associated with hemorrhagic colitis and hemolytic-uremic syndrome (HUS). As a result, this serotype is routinely screened for in clinical microbiology laboratories. With the bias toward the identification of the O157 serogroup in routine diagnostic processes, non-O157 STEC has been largely underrepresented in the epidemiology of STEC infections. This diagnostic bias is further complicated by the fact that many non-O157 STEC infections cause nonspecific gastroenteritis symptoms reminiscent of enteric viral infections. In this study, real-time PCR was used to amplify Shiga toxin genetic determinants (stx1 and stx2) from enriched stool samples that were initially submitted for the testing of enteric viruses in patients with suspected viral gastroenteritis between May and September of 2006, 2007, and 2008 (n = 2,702). Samples were submitted from the province of Alberta, Yukon, the Northwest Territories, and Nunavut, Canada. A total of 38 samples (1.4%) tested positive for Shiga toxin genes, and 15 isolates were cultured for further characterization. Several of the serotypes identified (O157:H7, O26:HNM, O26:H11, O103:H25, O121:H19, and O145:HNM) have been previously associated with outbreaks and HUS. This study outlines the importance of combining molecular methods with classical culture techniques to enhance the detection of emerging non-O157 as well as O157 serotypes in diarrheal stool samples. Furthermore, atypical diarrhea disease caused by non-O157 STEC can be routinely missed due to screening only for viral agents.
机译:产志贺毒素的大肠杆菌(STEC)是腹泻病的重要原因。最臭名昭著的STEC血清型是O157:H7,与出血性结肠炎和溶血性尿毒症综合征(HUS)有关。结果,在临床微生物学实验室中常规筛选了这种血清型。由于在常规诊断过程中倾向于鉴定O157血清群,因此非O157 STEC在STEC感染的流行病学中已大大不足。许多非O157 STEC感染引起非特异性胃肠炎症状的事实使这种诊断偏见更加复杂,使人联想起肠道病毒感染。在这项研究中,实时荧光定量PCR扩增了粪便样本中的志贺毒素遗传决定因子(stx1和stx2),这些样本最初于2006年5月至2007年9月之间用于疑似病毒性肠胃炎患者的肠道病毒检测,和2008年(n = 2,702)。样本是从加拿大育空地区,西北地区和加拿大努纳武特提交的。总共38个样品(1.4%)对志贺毒素基因检测为阳性,并培养了15个分离株以进行进一步鉴定。先前鉴定出的几种血清型(O157:H7,O26:HNM,O26:H11,O103:H25,O121:H19和O145:HNM)与暴发和HUS相关。这项研究概述了将分子方法与经典培养技术相结合以增强对腹泻粪便样本中新出现的非O157和O157血清型的检测的重要性。此外,由于仅进行病毒制剂的筛查,通常会漏掉非O157 STEC引起的非典型腹泻病。

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