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Evaluation of the Colorimetric VITEK 2 Card for Identification of Gram-Negative Nonfermentative Rods: Comparison to 16S rRNA Gene Sequencing

机译:比色VITEK 2卡鉴定革兰阴性非发酵棒的评估:与16S rRNA基因测序的比较。

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摘要

Ninety strains of a collection of well-identified clinical isolates of gram-negative nonfermentative rods collected over a period of 5 years were evaluated using the new colorimetric VITEK 2 card. The VITEK 2 colorimetric system identified 53 (59%) of the isolates to the species level and 9 (10%) to the genus level; 28 (31%) isolates were misidentified. An algorithm combining the colorimetric VITEK 2 card and 16S rRNA gene sequencing for adequate identification of gram-negative nonfermentative rods was developed. According to this algorithm, any identification by the colorimetric VITEK 2 card other than Achromobacter xylosoxidans, Acinetobacter sp., Burkholderia cepacia complex, Pseudomonas aeruginosa, and Stenotrophomonas maltophilia should be subjected to 16S rRNA gene sequencing when accurate identification of nonfermentative rods is of concern.
机译:使用新的比色VITEK 2卡评估了在5年内收集的90株公认的革兰氏阴性非发酵棒临床分离株中的90株。 VITEK 2比色系统鉴定出53种(59%)的分离物达到物种水平,鉴定出9种(10%)到属水平。 28个(31%)分离株被误认。开发了一种将比色VITEK 2卡和16S rRNA基因测序相结合的算法,用于充分鉴定革兰氏阴性非发酵棒。根据该算法,当需要关注非发酵杆的准确鉴定时,除木氧化无色杆菌,不动杆菌属,洋葱伯克霍尔德菌,铜绿假单胞菌和嗜麦芽单胞菌之外的比色VITEK 2卡鉴定均应进行16S rRNA基因测序。

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