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Detection of Campylobacter spp. in Chicken Fecal Samples by Real-Time PCR

机译:检测弯曲杆菌属。实时PCR检测鸡粪样品中的含量

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摘要

A real-time PCR assay for detecting thermophilic Campylobacter spp. directly in chicken feces has been developed. DNA was isolated from fecal material by using magnetic beads followed by PCR with a prealiquoted PCR mixture, which had been stored at −18°C. Campylobacter could be detected in less than 4 h, with a detection limit of 100 to 150 CFU/ml, in a fecal suspension. A bacterial internal control was added before DNA extraction to control both DNA isolation and the presence of PCR inhibitors in the samples. The assay was performed on 111 swab samples from a Danish surveillance program and compared to conventional culturing using selective enrichment. There was no statistically significant difference in performance between real-time PCR and culture by selective enrichment, and the diagnostic specificity was 0.96 with an agreement of 0.92. Therefore, the assay should be useful for screening poultry flocks for the presence of Campylobacter.
机译:用于检测嗜热弯曲杆菌属菌种的实时PCR分析。直接在鸡粪中已开发。通过使用磁珠从粪便中分离出DNA,然后使用预先分装的PCR混合物进行PCR,该混合物已保存在-18°C下。在粪便悬浮液中,可以在不到4小时的时间内检测到弯曲杆菌,检测限为100至150 CFU / ml。在提取DNA之前添加细菌内部对照,以控制样品中DNA的分离和PCR抑制剂的存在。对来自丹麦监测计划的111个拭子样品进行了测定,并与使用选择性富集的常规培养进行了比较。实时PCR和通过选择性富集的培养之间的性能没有统计学上的显着差异,诊断特异性为0.96,一致性为0.92。因此,该测定法对于筛选家禽群中是否存在弯曲杆菌应是有用的。

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