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Application and Evaluation of the Interlaboratory Reproducibility of tRNA Intergenic Length Polymorphism Analysis (tDNA-PCR) for Identification of Streptococcus Species

机译:tRNA基因间长度多态性分析(tDNA-PCR)实验室间可重复性在鉴定链球菌种中的应用和评价

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摘要

The discriminatory power, speed, and interlaboratory reproducibility of tRNA intergenic length polymorphism analysis (tDNA-PCR) combined with capillary electrophoresis was evaluated for the identification of streptococci. This method was carried out in three different laboratories under highly standardized conditions for 54 strains belonging to 18 different species. It was concluded that interlaboratory reproducibility of tDNA fingerprints produced by means of capillary electrophoresis was sufficiently high to permit the exchange between different laboratories and the construction of common libraries which can be consulted for comparison with fingerprints obtained independently in separate laboratories. In a second step, 17 other species were included in the study and examined in one of the participating laboratories. All Streptococcus species studied, except S. mitis, S. oralis, S. parasanguinis, S. pneumoniae, S. thermophilus, and S. vestibularis, showed distinguishable tDNA fingerprints. A database of well-characterized strains was constructed to enable computer-aided identification of unknown streptococcal isolates.
机译:评价了tRNA基因间长度多态性分析(tDNA-PCR)与毛细管电泳相结合的鉴别能力,速度和实验室间重现性,以鉴定链球菌。在高度标准化的条件下,在三个不同的实验室中对属于18个不同物种的54个菌株进行了此方法。结论是,通过毛细管电泳产生的tDNA指纹在实验室间的再现性足够高,可以在不同实验室之间进行交换,并可以构建共同的文库,以便与在单独的实验室中独立获得的指纹进行比较。第二步,将其他17种物种纳入研究并在其中一个参与实验室中进行了检查。研究的所有链球菌物种,除链球菌,口头链球菌,副血链球菌,肺炎链球菌,嗜热链球菌和前庭链球菌外,均具有可区分的tDNA指纹。建立了一个特征鲜明的菌株数据库,以使计算机辅助识别未知的链球菌分离株成为可能。

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