Antibiotics resistance and toxin profiles of Bacillus cereus-group isolates from fresh vegetables from German retail markets

摘要

FastTree phylogenetic comparison with whole genome data. A homologous group filtering and a group alignment were performed by PATRIC pipeline [ ] and an estimated phylogenetic tree from concatenated alignment sequences was calculated within the type strains ATCC 14579 (DSM 31 ), ATCC 10792 (DSM 2046 ), BCT-7112 (CECT 876 ), WSBC 10204 (DSM 11821 ), ATCC 6462 (DSM 2048 ) and AFS069374 using a FastTree method [ ]. DSM 2542 was used as outgroup strain