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The Phenylpyruvate Tautomerase Activity of trans-3-Chloroacrylic Acid Dehalogenase: Evidence for an Enol Intermediate in the Dehalogenase Reaction?

机译:反式3-氯丙烯酸脱卤酶的苯丙酮酸互变异构酶活性:脱卤酶反应中烯醇中间体的证据吗?

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摘要

The enzymatic conversion of cis- or trans-3-chloroacrylic acid to malonate semialdehyde is a key step in the bacterial degradation of the nematocide 1,3-dichloropropene. Two mechanisms have been proposed for the isomer-specific hydrolytic dehalogenases, cis- and trans-3-chloroacrylic acid dehalogenase (cis-CaaD and CaaD, respectively), responsible for this step. In one mechanism, the enol isomer of malonate semialdehyde is produced by the α,β-elimination of HCl from an initial halohydrin species. Phenylenolpyruvate has now been found to be a substrate for CaaD with a kcat/Km value that approaches the one determined for the CaaD reaction using trans-3-chloroacrylate. Moreover, the reaction is stereoselective, generating the 3S-isomer of [3-2H]phenylpyruvate in a 1.8:1 ratio in 2H2O. These two observations and a kinetic analysis of active site mutants of CaaD suggest that the active site of CaaD is responsible for the phenylpyruvate tautomerase (PPT) activity. The activity is a striking example of catalytic promiscuity and could reflect the presence of an enol intermediate in CaaD-mediated dehalogenation of trans-3-chloroacrylate. CaaD and cis-CaaD represent different families in the tautomerase superfamily, a group of structurally homologous proteins characterized by a core β–α–β building block and a catalytic Pro-1. The eukaryotic immunoregulatory protein known as macrophage migration inhibitory factor (MIF), also a tautomerase superfamily member, exhibits a PPT activity but the biological relevance is unknown. In addition to the mechanistic implications, these results establish a functional link between CaaD and the superfamily tautomerases, highlight the catalytic and binding promiscuity of the β–α–β scaffold, and suggest that the PPT activity of MIF could reflect a partial reaction in an unknown MIF-catalyzed reaction.
机译:顺式或反式3-氯丙烯酸的酶促转化为丙二酸半醛是线虫杀菌剂1,3-二氯丙烯细菌降解的关键步骤。已经提出了两种机制用于异构体特异性水解脱卤素酶,即顺式和反式-3-氯丙烯酸脱卤素酶(分别为顺式CaaD和反式CaaD),这是该步骤的原因。在一种机理中,丙二酸酯半醛的烯醇异构体是通过从最初的卤代醇物质中的α,β-消除HCl而产生的。现已发现苯基烯醇丙酮酸是CaaD的底物,其kcat / Km值接近使用反式3-氯丙烯酸酯为CaaD反应确定的底物。此外,该反应是立体选择性的,在 2 H2O中以1.8:1的比例生成[3- 2 H]苯基丙酮酸的3S异构体。这两个观察结果以及对CaaD活性位点突变体的动力学分析表明,CaaD的活性位点负责苯丙酮酸互变异构酶(PPT)的活性。该活性是催化混杂的一个显着例子,并且可以反映出在CaaD介导的反式3-氯丙烯酸酯的脱卤作用中烯醇中间体的存在。 CaaD和cis-CaaD代表互变异构酶超家族中的不同家族,互变异构酶超家族是一组结构上同源的蛋白质,其特征在于核心β-α-β结构单元和催化Pro-1。真核生物免疫调节蛋白称为巨噬细胞迁移抑制因子(MIF),也是互变异构酶超家族成员,具有PPT活性,但生物学相关性未知。除了机理上的意义外,这些结果还建立了CaaD与超家族互变异构酶之间的功能联系,突出了β-α-β支架的催化和结合混杂性,并表明MIF的PPT活性可能反映了一个部分反应。未知的MIF催化反应。

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