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Compressed Sensing Reconstruction for Whole-Heart Imaging with 3D Radial Trajectories: A GPU Implementation

机译:3D径向轨迹全心脏成像的压缩传感重建:GPU实现

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摘要

A disadvantage of 3D isotropic acquisition in whole-heart coronary MRI is the prolonged data acquisition time. Isotropic 3D radial trajectories allow undersampling of k-space data in all three spatial dimensions, enabling accelerated acquisition of the volumetric data. Compressed sensing (CS) reconstruction can provide further acceleration in the acquisition by removing the incoherent artifacts due to undersampling and improving the image quality. However, the heavy computational overhead of the CS reconstruction has been a limiting factor for its application. In this paper, a parallelized implementation of an iterative CS reconstruction method for 3D radial acquisitions using a commercial graphics processing unit (GPU) is presented. The execution time of the GPU-implemented CS reconstruction was compared with that of the C++ implementation and the efficacy of the undersampled 3D radial acquisition with CS reconstruction was investigated in both phantom and whole-heart coronary data sets. Subsequently, the efficacy of CS in suppressing streaking artifacts in 3D whole-heart coronary MRI with 3D radial imaging and its convergence properties were studied. The CS reconstruction provides improved image quality (in terms of vessel sharpness and suppression of noise-like artifacts) compared with the conventional 3D gridding algorithm and the GPU implementation greatly reduces the execution time of CS reconstruction yielding 34–54 times speed-up compared with C++ implementation.
机译:全心脏冠状动脉MRI中的3D各向同性采集的缺点是延长的数据采集时间。各向同性的3D径向轨迹允许在所有三个空间尺寸中允许k空间数据的欠采样,从而加速获取体积数据。压缩传感(CS)重建可以通过消除由于欠采样和提高图像质量而去除非相干工件来提供进一步的加速度。然而,CS重建的繁重计算开销是其应用的限制因素。在本文中,呈现了使用商业图形处理单元(GPU)的3D径向采集的迭代CS重建方法的并行实现。将GPU实施的CS重建的执行时间与C ++实现的执行时间进行了比较,并且在幻像和全心脏冠状动脉数据集中研究了对CS重建的uplatePLed 3D径向采集的功效。随后,研究了CS在抑制3D全心脏冠状动脉MRI中具有3D径向成像的条纹伪影及其收敛性的疗效。与传统的3D网格算法相比,CS重建提供了改进的图像质量(就血管锐度和噪声样伪像的抑制)大大减少了CS重建的执行时间,而速度提升34-54倍。 C ++实现。

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