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Concordant Chemical Reaction Networks and the Species-Reaction Graph

机译:交叉化学反应网络和物种反应图

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摘要

In a recent paper it was shown that, for chemical reaction networks possessing a subtle structural property called concordance, dynamical behavior of a very circumscribed (and largely stable) kind is enforced, so long as the kinetics lies within the very broad and natural weakly monotonic class. In particular, multiple equilibria are precluded, as are degenerate positive equilibria. Moreover, under certain circumstances, also related to concordance, all real eigenvalues associated with a positive equilibrium are negative. Although concordance of a reaction network can be decided by readily available computational means, we show here that, when a nondegenerate network’s Species-Reaction Graph satisfies certain mild conditions, concordance and its dynamical consequences are ensured. These conditions are weaker than earlier ones invoked to establish kinetic system injectivity, which, in turn, is just one ramification of network concordance. Because the Species-Reaction Graph resembles pathway depictions often drawn by biochemists, results here expand the possibility of inferring significant dynamical information directly from standard biochemical reaction diagrams.
机译:在最近的一篇论文中表明,对于具有微妙的结构特性(称为一致性)的化学反应网络,只要动力学处于非常宽泛且自然的弱单调性之内,就会强制执行非常有限(且在很大程度上稳定)类型的动力学行为。类。特别地,排除了多个平衡,以及简并的正平衡。而且,在某些情况下,也与一致性有关,与正平衡相关的所有实际特征值均为负。尽管可以通过随时可用的计算方法来确定反应网络的一致性,但我们在此处显示,当非退化网络的“物种反应图”满足某些温和条件时,可以确保一致性及其动态后果。这些条件比建立动力学系统内插性的早期条件要弱,而后者又只是网络一致性的一种分支。由于“物种反应图”类似于生物化学家经常绘制的路径描述,因此此处的结果扩展了直接从标准生物化学反应图中推断出重要动力学信息的可能性。

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