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Destabilization domain approach adapted for regulated protein expression in the protozoan parasite Entamoeba histolytica

机译:适用于原生动物寄生虫组织解脂变形虫中调节蛋白表达的去稳定域方法

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摘要

A plethora of information has been gained by sequencing the genome of the human parasite Entamoeba histolytica, however a lack of robust genetic tools hampers experimental elucidation of gene functions. We adapted the destabilization domain (DD) approach for modulation of protein levels in E. histolytica using the destabilization domains of FK506 binding protein (ddFKBP) and dihydrofolate reductase (ddDHFR), respectively. In our studies, the ddFKBP appears to be more tightly regulated than ddDHFR, with minimal detectable protein in trophozoites in the absence of the stabilizing compound. The on- and off-rate kinetics for ddFKBP were rapid, with stabilization and degradation within 3 h of addition or removal of stabilizing compound, respectively. The kinetics for ddDHFR was different, with rapid stabilization (within 3 h of stabilizing compound being added) but much slower degradation (protein not destabilized until 24 h after compound removal). Furthermore, we demonstrated that for the ddFKBP, the standard stabilizing compound Shield-1 could be effectively replaced by two cheaper alternatives (rapamycin and FK506), indicating that the more cost-effective alternatives are viable options for use with E. histolytica. Thus, the DD approach represents a powerful method to study protein functions in E. histolytica and adds to the catalog of genetic tools that could be used to study this important human pathogen.
机译:通过对人类寄生虫组织解组织Entamoeba histolytica的基因组进行测序,已经获得了大量信息,但是缺乏强大的遗传工具阻碍了对基因功能的实验性阐明。我们分别使用FK506结合蛋白(ddFKBP)和二氢叶酸还原酶(ddDHFR)的去稳定化域来调整去稳定域(DD)方法来调节溶血性大肠杆菌中的蛋白质水平。在我们的研究中,在缺乏稳定化合物的情况下,滋养体中的ddFKBP似乎比ddDHFR受到更严格的调控,蛋白质含量最低。 ddFKBP的开和关速率动力学迅速,分别在添加或去除稳定化合物后3小时内稳定和降解。 ddDHFR的动力学是不同的,具有快速稳定(在添加稳定化合物3小时内)但降解慢得多(蛋白质直到去除化合物后24 h才稳定)。此外,我们证明了对于ddFKBP,标准的稳定化合物Shield-1可以有效地被两个更便宜的替代品(雷帕霉素和FK506)替代,这表明更具成本效益的替代品是与溶组织性大肠杆菌一起使用的可行选择。因此,DD方法代表了一种研究组织溶大肠杆菌中蛋白质功能的强大方法,并增加了可用于研究这种重要人类病原体的遗传工具目录。

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