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Rapid Molecular Detection of Multidrug-Resistant Tuberculosis by PCR-Nucleic Acid Lateral Flow Immunoassay

机译:PCR-核酸侧向免疫分析法快速检测耐多药结核病分子

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摘要

Several existing molecular tests for multidrug-resistant tuberculosis (MDR-TB) are limited by complexity and cost, hindering their widespread application. The objective of this proof of concept study was to develop a simple Nucleic Acid Lateral Flow (NALF) immunoassay as a potential diagnostic alternative, to complement conventional PCR, for the rapid molecular detection of MDR-TB. The NALF device was designed using antibodies for the indirect detection of labeled PCR amplification products. Multiplex PCR was optimized to permit the simultaneous detection of the drug resistant determining mutations in the 81-bp hot spot region of the rpoB gene (rifampicin resistance), while semi-nested PCR was optimized for the S315T mutation detection in the katG gene (isoniazid resistance). The amplification process additionally targeted a conserved region of the genes as Mycobacterium tuberculosis (Mtb) DNA control. The optimized conditions were validated with the H37Rv wild-type (WT) Mtb isolate and Mtb isolates with known mutations (MT) within the rpoB and katG genes. Results indicate the correct identification of WT (drug susceptible) and MT (drug resistant) Mtb isolates, with the least limit of detection (LOD) being 104 genomic copies per PCR reaction. NALF is a simple, rapid and low-cost device suitable for low resource settings where conventional PCR is already employed on a regular basis. Moreover, the use of antibody-based NALF to target primer-labels, without the requirement for DNA hybridization, renders the device generic, which could easily be adapted for the molecular diagnosis of other infectious and non-infectious diseases requiring nucleic acid detection.
机译:现有的几种耐多药结核病分子检测(MDR-TB)受到复杂性和成本的限制,从而阻碍了其广泛应用。本概念验证研究的目的是开发一种简单的核酸侧向流(NALF)免疫测定法,作为对常规PCR的补充,以快速检测MDR-TB的潜在诊断方法。使用抗体设计NALF设备,用于间接检测标记的PCR扩增产物。优化了多重PCR,以允许同时检测rpoB基因的81 bp热点区域中的耐药性决定突变(利福平耐药),同时优化了半嵌套式PCR,以检测katG基因中的S315T突变(异烟肼)抵抗性)。扩增过程还以结核分枝杆菌(Mtb)DNA对照为靶基因的保守区域。优化的条件通过rpoB和katG基因内的H37Rv野生型(WT)Mtb分离株和具有已知突变(MT)的Mtb分离株进行验证。结果表明正确鉴定了WT(药物敏感)和MT(耐药)Mtb分离株,每个PCR反应的最小检出限(LOD)为10 4 基因组拷贝。 NALF是一种简单,快速且低成本的设备,适用于已经定期使用常规PCR的低资源设置。此外,基于抗体的NALF无需靶向DNA杂交即可用于靶向引物标记,从而使该设备具有通用性,可以轻松地用于需要核酸检测的其他传染性和非传染性疾病的分子诊断。

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