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Bacterial Diversity and Community Structure in Korean Ginseng Field Soil Are Shifted by Cultivation Time

机译:人参田间土壤细菌多样性和群落结构随耕种时间的变化而变化

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摘要

Traditional molecular methods have been used to examine bacterial communities in ginseng-cultivated soil samples in a time-dependent manner. Despite these efforts, our understanding of the bacterial community is still inadequate. Therefore, in this study, a high-throughput sequencing approach was employed to investigate bacterial diversity in various ginseng field soil samples over cultivation times of 2, 4, and 6 years in the first and second rounds of cultivation. We used non-cultivated soil samples to perform a comparative study. Moreover, this study assessed changes in the bacterial community associated with soil depth and the health state of the ginseng. Bacterial richness decreased through years of cultivation. This study detected differences in relative abundance of bacterial populations between the first and second rounds of cultivation, years of cultivation, and health states of ginseng. These bacterial populations were mainly distributed in the classes Acidobacteria, Alphaproteobacteria, Deltaproteobacteria, Gammaproteobacteria, and Sphingobacteria. In addition, we found that pH, available phosphorus, and exchangeable Ca+ seemed to have high correlations with bacterial class in ginseng cultivated soil.
机译:传统的分子方法已被用于以时间依赖的方式检查人参栽培土壤样品中的细菌群落。尽管做出了这些努力,但我们对细菌群落的了解仍然不足。因此,在这项研究中,采用高通量测序方法研究了第一轮和第二轮培养中2、4和6年的培养时间下各种人参田间土壤样品中的细菌多样性。我们使用未耕种的土壤样品进行比较研究。此外,这项研究评估了与土壤深度和人参健康状况有关的细菌群落的变化。通过多年的培养细菌丰富度下降。这项研究发现了第一轮和第二轮耕作,耕种年限以及人参健康状况之间细菌种群相对丰度的差异。这些细菌种群主要分布在酸性细菌,α-蛋白细菌,δ-蛋白细菌,γ-蛋白细菌和Sphingobacteria类中。此外,我们发现人参栽培土壤中的pH,有效磷和可交换的Ca + 似乎与细菌种类具有高度相关性。

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