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A noise reduction method for quantifying nanoparticle light scattering in low magnification dark-field microscope far-field images

机译:用于量化低倍暗场显微镜远场图像中纳米粒子光散射的降噪方法

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摘要

Nanoparticles have become a powerful tool for cell imaging, biomolecule and cell and protein interaction studies, but are difficult to rapidly and accurately measure in most assays. Dark-field microscope (DFM) image analysis approaches used to quantify nanoparticles require high-magnification near-field (HN) images that are labor intensive due to a requirement for manual image selection and focal adjustments needed when identifying and capturing new regions of interest. Low-magnification far-field (LF) DFM imagery is technically simpler to perform but cannot be used as an alternate to HN-DFM quantification, since it is highly sensitive to surface artifacts and debris that can easily mask nanoparticle signal. We now describe a new noise reduction approach that markedly reduces LF-DFM image artifacts to allow sensitive and accurate nanoparticle signal quantification from LF-DFM images. We have used this approach to develop a “Dark Scatter Master” (DSM) algorithm for the popular NIH image analysis program ImageJ, which can be readily adapted for use with automated high-throughput assay analyses. This method demonstrated robust performance quantifying nanoparticles in different assay formats, including a novel method that quantified extracellular vesicles in patient blood sample to detect pancreatic cancer cases. Based on these results, we believe our LF-DFM quantification method can markedly decrease the analysis time of most nanoparticle-based assays to impact both basic research and clinical analyses.
机译:纳米粒子已成为细胞成像,生物分子以及细胞和蛋白质相互作用研究的强大工具,但在大多数测定中难以快速准确地进行测量。用于量化纳米颗粒的暗场显微镜(DFM)图像分析方法需要高倍放大的近场(HN)图像,这是劳动密集型的,这是由于在识别和捕获新的感兴趣区域时需要手动选择图像并需要进行焦点调整。低倍率远场(LF)DFM图像在技术上更易于执行,但不能用作HN-DFM量化的替代方法,因为它对表面伪影和碎片非常敏感,可以轻易掩盖纳米粒子信号。现在,我们描述一种新的降噪方法,该方法可显着减少LF-DFM图像伪影,以允许从LF-DFM图像进行灵敏而准确的纳米颗粒信号定量。我们已经使用这种方法为流行的NIH图像分析程序ImageJ开发了“ Dark Scatter Master”(DSM)算法,该算法可以很容易地用于自动高通量分析。该方法展示了在不同测定形式下定量分析纳米颗粒的强大性能,包括一种定量患者血液样本中细胞外囊泡以检测胰腺癌病例的新方法。基于这些结果,我们相信我们的LF-DFM定量方法可以显着减少大多数基于纳米颗粒的测定的分析时间,从而影响基础研究和临床分析。

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