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Determination of bending rigidity and tilt modulus of lipid membranes from real-space fluctuation analysis of molecular dynamics simulations

机译:通过分子动力学模拟的真实空间波动分析确定脂质膜的弯曲刚度和倾斜模量

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摘要

We have recently developed a novel computational methodology (termed RSF for Real-Space Fluctuations) to quantify the bending rigidity and tilt modulus of lipid membranes from real-space analysis of fluctuations in the tilt and splay degrees of freedom as sampled in molecular dynamics (MD) simulations. In this article, we present a comprehensive study that combines results from the application of the RSF method to a wide range of lipid bilayer systems that encompass membranes of different fluidities and sizes, including lipids with saturated and unsaturated lipid tails, single and multi-component lipid systems, as well as non-standard lipids such as the four-tailed cardiolipin. By comparing the material properties calculated with the RSF method to those obtained from experimental data and from other computational methodologies, we rigorously demonstrate the validity of our approach and show its robustness. This should allow for future applications of even more complex lipidic assemblies, whose material properties are not tractable by other computational techniques. In addition, we discuss the relationship between different definitions of the tilt modulus appearing in current literature to address some important unresolved discrepancies in the field.
机译:我们最近开发了一种新颖的计算方法(用于实际空间波动的RSF),可以通过对分子动力学(MD)中采样的倾斜度和展开自由度的波动进行实际空间分析来量化脂质膜的弯曲刚度和倾斜模量)模拟。在本文中,我们提出了一项全面的研究,该研究将RSF方法应用于多种脂质双层系统的结果相结合,该脂质双层系统包含不同流动性和大小的膜,包括具有饱和和不饱和脂质尾巴的脂质,单组分和多组分脂质系统,以及非标准脂质,例如四尾心磷脂。通过将用RSF方法计算的材料性能与从实验数据和其他计算方法获得的材料性能进行比较,我们严格证明了该方法的有效性并显示了其鲁棒性。这应该允许将来更复杂的脂质装配体的应用,这些装配体的材料特性无法通过其他计算技术加以控制。此外,我们讨论了当前文献中出现的倾斜模量的不同定义之间的关系,以解决该领域中一些尚未解决的重要差异。

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