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Quantifying local tumor morphological changes with Jacobian map for prediction of pathologic tumor response to chemo-radiotherapy in locally advanced esophageal cancer

机译:用雅可比图量化局部肿瘤形态变化以预测局部晚期食管癌对化学放疗的病理性肿瘤反应

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摘要

We proposed a framework to detect and quantify local tumor morphological changes due to chemo-radiotherapy (CRT) using Jacobian map and to extract quantitative radiomic features from the Jacobian map to predict the pathologic tumor response in locally advanced esophageal cancer patients. In 20 patients who underwent CRT, a multi-resolution BSpline deformable registration was performed to register the follow-up (post-CRT) CT to the baseline CT image. Jacobian map (J) was computed as the determinant of the gradient of the Deformation Vector Field. Jacobian map measured the ratio of local tumor volume change where J < 1 indicated tumor shrinkage and J > 1 denoted expansion. The tumor was manually delineated and corresponding anatomical landmarks were generated on the baseline and follow-up images. Intensity, texture and geometry features were then extracted from the Jacobian map of the tumor to quantify tumor morphological changes. The importance of each Jacobian feature in predicting pathologic tumor response was evaluated by both univariate and multivariate analysis. We constructed a multivariate prediction model by using a support vector machine (SVM) classifier coupled with a least absolute shrinkage and selection operator (LASSO) for feature selection. The SVM-LASSO model was evaluated using ten-times repeated 10-fold cross-validation (10×10-fold CV). After registration, the average Target Registration Error was 4.30±1.09mm (LR:1.63mm AP:1.59mm SI:3.05mm) indicating registration error was within two voxels and close to 4mm slice thickness. Visually, Jacobian map showed smoothly-varying local shrinkage and expansion regions in a tumor. Quantitatively, the average Median Jacobian was 0.80±0.10 and 1.05±0.15 for responder and non-responder tumors, respectively. These indicated that on average responder tumors had 20% median volume shrinkage while non-responder tumors had 5% median volume expansion. In univariate analysis, Minimum Jacobian (p=0.009, AUC=0.98) and Median Jacobian (p=0.004, AUC=0.95) were the most significant predictors. The SVM-LASSO model achieved the highest accuracy when these two features were selected (Sensitivity=94.4%, Specificity=91.8%, AUC=0.94). Novel features extracted from the Jacobian map quantified local tumor morphological changes using only baseline tumor contour without post-treatment tumor segmentation. The SVM-LASSO model using Median Jacobian and Minimum Jacobian achieved high accuracy in predicting pathologic tumor response. Jacobian map showed great potential for longitudinal evaluation of tumor response.
机译:我们提出了一个框架,使用雅可比图检测和量化由于化学放疗(CRT)引起的局部肿瘤形态变化,并从雅可比图提取定量放射特征以预测局部晚期食管癌患者的病理性肿瘤反应。在20例接受了CRT的患者中,进行了多分辨率BSpline变形注册,以将随访(CRT后)CT注册到基线CT图像中。雅可比图(J)被计算为变形矢量场的梯度的行列式。雅可比图测量了局部肿瘤体积变化的比率,其中J <1表示肿瘤缩小,J> 1表示扩张。手动描绘肿瘤,并在基线和随访图像上生成相应的解剖标志。然后从肿瘤的雅可比图提取强度,质地和几何特征,以量化肿瘤形态变化。通过单因素和多因素分析评估了每个雅可比特征在预测病理性肿瘤反应中的重要性。我们通过使用支持向量机(SVM)分类器结合最小绝对收缩和选择算子(LASSO)进行特征选择来构建多元预测模型。使用十次重复的10倍交叉验证(10×10倍CV)评估SVM-LASSO模型。配准后,平均目标配准误差为4.30±1.09mm(LR:1.63mm AP:1.59mm SI:3.05mm),表明配准误差在两个体素内且接近4mm切片厚度。视觉上,雅可比图显示了肿瘤中局部收缩和扩张区域的平滑变化。定量地,反应性和非反应性肿瘤的平均雅可比中值分别为0.80±0.10和1.05±0.15。这些表明,平均响应者肿瘤的中位体积收缩率为20%,而非响应者肿瘤的中位体积收缩率为5%。在单变量分析中,最小雅可比矩阵(p = 0.009,AUC = 0.98)和中位数雅可比矩阵(p = 0.004,AUC = 0.95)是最重要的预测指标。当选择这两个特征时,SVM-LASSO模型获得了最高的准确性(灵敏度= 94.4%,特异性= 91.8%,AUC = 0.94)。从雅可比图提取的新特征仅使用基线肿瘤轮廓即可量化局部肿瘤形态变化,而无需进行治疗后的肿瘤分割。使用中值雅可比和最小雅可比的SVM-LASSO模型在预测病理性肿瘤反应中实现了高精度。雅可比图谱显示了对肿瘤反应进行纵向评估的巨大潜力。

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