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CBMT-24. MITOCHONDRIAL DNA CONTENT IN GLIOBLASTOMA AND ITS CLINICAL SIGNIFICANCE

机译:CBMT-24。胶质母细胞线粒体DNA含量及其临床意义

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Evidence of altered mitochondrial DNA (mtDNA) content in several malignancies has surfaced in recent years. However, in glioblastoma, this aspect remains obscure. Hence, we have studied mtDNA content in glioblastoma at diagnosis and recurrence.METHODSFormalin fixed paraffin embedded tissue of newly diagnosed glioblastoma (n=100), paired recurrent glioblastoma (n=16 pairs) and non-neoplastic brain (n=30) archived in the department of Neuropathology, NIMHANS, were utilized for the study. Clinical details of the patients were obtained from files. IDH, ATRX and TERT promoter mutations, MGMT promoter methylation and EGFR amplification were assessed using immunohistochemistry, Sanger’s sequencing, methylation specific PCR and fluorescent insitu hybridization. mtDNA copy number was analyzed using quantitative real time PCR (relative quantification). The mtDNA content was calculated as percentage of normal using the formula 2- ΔΔCT x 100. Hence, for example, 20% mtDNA copy number means that if non-neoplastic brain tissue contains 100 copies of mtDNA, the tumor contains only 20 copies.
机译:近年来,已经出现了一些恶性肿瘤中线粒体DNA(mtDNA)含量改变的证据。然而,在胶质母细胞瘤中,这方面仍然不清楚。因此,我们研究了胶质母细胞瘤在诊断和复发中的mtDNA含量.METHODS新诊断的胶质母细胞瘤(n = 100),成对复发性胶质母细胞瘤(n = 16对)和非肿瘤性脑(n = 30)的福尔马林固定石蜡包埋组织该研究使用了神经病理学系NIMHANS。患者的临床细节可从档案中获得。使用免疫组化,Sanger测序,甲基化特异性PCR和荧​​光原位杂交对IDH,ATRX和TERT启动子突变,MGMT启动子甲基化和EGFR扩增进行了评估。使用实时定量PCR(相对定量)分析mtDNA拷贝数。使用公式2 x 100,以正常百分比计算mtDNA含量。因此,例如20%的mtDNA拷贝数意味着如果非肿瘤性脑组织包含100拷贝的mtDNA,则肿瘤仅包含20个拷贝。

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