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ParB dynamics and the critical role of the CTD in DNA condensation unveiled by combined force-fluorescence measurements

机译:结合力荧光测量揭示了ParB动力学和CTD在DNA缩合中的关键作用

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摘要

Bacillus subtilis ParB forms multimeric networks involving non-specific DNA binding leading to DNA condensation. Previously, we found that an excess of the free C-terminal domain (CTD) of ParB impeded DNA condensation or promoted decondensation of pre-assembled networks (Fisher et al., 2017). However, interpretation of the molecular basis for this phenomenon was complicated by our inability to uncouple protein binding from DNA condensation. Here, we have combined lateral magnetic tweezers with TIRF microscopy to simultaneously control the restrictive force against condensation and to visualise ParB protein binding by fluorescence. At non-permissive forces for condensation, ParB binds non-specifically and highly dynamically to DNA. Our new approach concluded that the free CTD blocks the formation of ParB networks by heterodimerisation with full length DNA-bound ParB. This strongly supports a model in which the CTD acts as a key bridging interface between distal DNA binding loci within ParB networks.
机译:枯草芽孢杆菌ParB形成涉及非特异性DNA结合的多聚体网络,导致DNA缩合。以前,我们发现ParB的游离C末端结构域(CTD)过量会阻止DNA缩合或促进预组装网络的去缩合(Fisher等人,2017)。但是,由于我们无法从DNA缩合中解开蛋白质结合,因此对该现象的分子基础进行了解释。在这里,我们将横向磁镊子与TIRF显微镜相结合,以同时控制对凝结的限制力,并通过荧光观察ParB蛋白结合。在非允许的凝结力下,ParB与DNA非特异性且高度动态地结合。我们的新方法得出结论,游离的CTD通过与全长DNA结合的ParB异源二聚作用阻止了ParB网络的形成。这有力地支持了其中CTD充当ParB网络中远端DNA结合基因座之间的关键桥接界面的模型。

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