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Association of RXR-Gamma Gene Variants with Familial Combined Hyperlipidemia: Genotype and Haplotype Analysis

机译:RXR-Gamma基因变异与家族性合并高脂血症的关联:基因型和单倍型分析

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摘要

Background. Familial combined hyperlipidemia (FCHL), the most common genetic form of hyperlipdemia, is characterized by a strong familial clustering and by premature coronary heart disease. The FCHL locus has been mapped to human chromosome 1q21-q23. This region includes the retinoid X receptor gamma (RXRG), a nuclear factor member of the RXR superfamily, which plays important roles in lipid homeostasis. Objective. To investigate the possible role of the RXRG gene in the genetic susceptibility to FCHL. Methods. Variations in RXRG gene were searched by direct sequencing, and the identified SNPs were genotyped by PCR-RFLP in 192 FCHL individuals from 74 families and in 119 controls. Results. We identified 5 polymorphisms in the RXRG gene (rs1128977, rs2651860, rs2134095, rs283696, and rs10918169). Genotyping showed that the A-allele of rs283696 SNP was significantly associated with FCHL (corrected P, P c < 0.01). Also the alleles of the rs10918169 and of the rs2651860 SNP were more frequent in FCHL subjects compared to those in controls, although not significantly after correction. When the clinical characteristics of the FCHL subjects were stratified by allele carrier status for each SNP, the rs2651860 SNP was significantly associated with increased levels of LDL-cholesterol and of Apo-B in T-allele carriers (P < 0.04). Finally, haplotypes analysis with all 5 SNPs confirmed the significant association of RXRG gene with FCHL. Specifically, the haplotype containing all 3 “at-risk” alleles, significantly associated with FCHL (A-allele of rs283696, G-allele of rs10918169, and T-allele of rs2651860), showed an OR (Odds Ratio) of 2.02, P c < 0.048. Conversely, the haplotype without all these 3 alleles was associated with a reduced risk for FCHL (OR = 0.39, P c < 0.023). The “at-risk” haplotype CTTAG was also associated with higher LDL-C (P < 0.015). In conclusion, variation in the RXRG gene may contribute to the genetic dyslipidemia in FCHL subjects.
机译:背景。家族性高脂血症(FCHL)是高脂血症最常见的遗传形式,其特征是家族性强聚集性和冠心病早发。 FCHL基因座已被定位到人类染色体1q21-q23。该区域包括类维生素A X受体γ(RXRG),它是RXR超家族的核因子成员,在脂质体内平衡中起重要作用。目的。目的探讨RXRG基因在FCHL遗传易感性中的可能作用。方法。通过直接测序搜索RXRG基因的变异,并通过PCR-RFLP对来自74个家庭的192个FCHL个体和119个对照的SNP进行基因分型。结果。我们在RXRG基因中鉴定了5个多态性(rs1128977,rs2651860,rs2134095,rs283696和rs10918169)。基因分型显示rs283696 SNP的A等位基因与FCHL显着相关(校正后的P,P c <0.01)。与对照组相比,FCHL受试者中rs10918169和rs2651860 SNP的等位基因频率更高,尽管校正后不明显。当按每个SNP的等位基因携带者状态对FCHL受试者的临床特征进行分层时,rs2651860 SNP与T等位基因携带者中LDL胆固醇和Apo-B的水平升高显着相关(P <0.04)。最后,对所有5个SNP的单倍型分析证实了RXRG基因与FCHL的显着关联。具体而言,包含所有3个“高风险”等位基因的单倍型均与FCHL(rs283696的A等位基因,rs10918169的G等位基因和rs2651860的T等位基因)显着相关,其OR(几率)为2.02,P c <0.048。相反,没有所有这三个等位基因的单倍型与FCHL的风险降低相关(OR = 0.39,P c <0.023)。 “高危”单倍型CTTAG也与较高的LDL-C相关(P <0.015)。总之,RXRG基因的变异可能导致FCHL受试者的遗传性血脂异常。

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