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A tightly regulated and adjustable CRISPR-dCas9 based AND gate in yeast

机译:基于酵母的严格调控和可调的CRISPR-dCas9 AND门

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摘要

The robust and precise on and off switching of one or more genes of interest, followed by expression or repression is essential for many biological circuits as well as for industrial applications. However, many regulated systems published to date influence the viability of the host cell, show high basal expression or enable only the overexpression of the target gene without the possibility of fine regulation. Herein, we describe an AND gate designed to overcome these limitations by combining the advantages of three well established systems, namely the scaffold RNA CRISPR/dCas9 platform that is controlled by Gal10 as a natural and by LexA-ER-AD as heterologous transcription factor. We hence developed a predictable and modular, versatile expression control system. The selection of a reporter gene set up combining a gene of interest (GOI) with a fluorophore by the ribosomal skipping T2A sequence allows to adapt the system to any gene of interest without losing reporter function. In order to obtain a better understanding of the underlying principles and the functioning of our system, we backed our experimental findings with the development of a mathematical model and single-cell analysis.
机译:对于许多生物回路以及工业应用来说,一个或多个目标基因的鲁棒性和精确的开/关切换,然后表达或阻遏是必不可少的。然而,迄今为止公开的许多受调控的系统影响宿主细胞的生存力,显示高的基础表达或仅使靶基因过表达而无可能进行精细调控。在这里,我们描述了一个AND门,旨在通过结合三个完善的系统的优势来克服这些局限性,这三个系统即由Gal10作为天然的支架和LexA-ER-AD作为异源转录因子控制的支架RNA CRISPR / dCas9平台。因此,我们开发了一种可预测且模块化的多功能表情控制系统。通过跳过核糖体T2A序列来选择将目标基因(GOI)与荧光团结合起来的报告基因,可以使系统适应任何目标基因,而不会失去报告功能。为了更好地理解基本原理和系统功能,我们通过开发数学模型和单细胞分析来支持我们的实验结果。

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