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Characterization and genomic analysis of two Staphylococcus aureus bacteriophages isolated from poultry/livestock farms

机译:从家禽/畜牧场分离出的两种金黄色葡萄球菌噬菌体的表征和基因组分析

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摘要

Staphylococcus aureus is one of the most important pathogens, causing various diseases in humans and animals. As methicillin-resistant S. aureus (MRSA) has become increasingly prevalent, controlling this pathogen with standard antibiotic treatment has become challenging. Bacteriophages (phages) have attracted interest as alternative antibacterial agents to control MRSA. In this study, we isolated six S. aureus phages from soils of poultry/livestock farms. Based on the results of host range determination with 150 S. aureus strains and restriction enzyme treatment of phage DNA, two phages, designated SP5 and SP6, were selected for further characterization and genome sequencing. Both SP5 and SP6 were classified as members of the family Siphoviridae. The genome of SP5 comprises 43 305 bp and contains 63 ORFs, while the SP6 genome comprises 42 902 bp and contains 61 ORFs. Although they have different host spectra, the phage genomes exhibit high nucleotide similarity to each other. Adsorption assay results suggested that the host range determinants of the two phages are involved in both adsorption and infection. Comparative genomic analyses of the two phages provided evidence that the lysogenic/lytic control module and tail proteins may be important for host specificity.
机译:金黄色葡萄球菌是最重要的病原体之一,可引起人类和动物多种疾病。随着耐甲氧西林的金黄色葡萄球菌(MRSA)的日益普及,用标准抗生素治疗控制这种病原体变得具有挑战性。噬菌体(噬菌体)作为控制MRSA的替代抗菌剂引起了人们的兴趣。在这项研究中,我们从家禽/牲畜养殖场的土壤中分离出六个金黄色葡萄球菌噬菌体。根据150株金黄色葡萄球菌的宿主范围测定结果和噬菌体DNA的限制性内切酶处理,选择了两个噬菌体,分别命名为SP5和SP6,以进行进一步表征和基因组测序。 SP5和SP6均被归为Siphoviridae家族的成员。 SP5的基因组包含43 305 bp,包含63个ORF,而SP6的基因组包含42 902 bp,包含61个ORF。尽管它们具有不同的宿主光谱,但是噬菌体基因组彼此之间显示出高核苷酸相似性。吸附测定结果表明,两种噬菌体的宿主范围决定因素都参与了吸附和感染。两种噬菌体的比较基因组分析提供了证据,表明溶原/裂解控制模块和尾部蛋白可能对宿主特异性很重要。

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