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Using a Nonparametric Multilevel Latent Markov Model to Evaluate Diagnostics for Trachoma

机译:使用非参数多级隐马尔可夫模型评估沙眼的诊断

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摘要

In disease control or elimination programs, diagnostics are essential for assessing the impact of interventions, refining treatment strategies, and minimizing the waste of scarce resources. Although high-performance tests are desirable, increased accuracy is frequently accompanied by a requirement for more elaborate infrastructure, which is often not feasible in the developing world. These challenges are pertinent to mapping, impact monitoring, and surveillance in trachoma elimination programs. To help inform rational design of diagnostics for trachoma elimination, we outline a nonparametric multilevel latent Markov modeling approach and apply it to 2 longitudinal cohort studies of trachoma-endemic communities in Tanzania (2000–2002) and The Gambia (2001–2002) to provide simultaneous inferences about the true population prevalence of Chlamydia trachomatis infection and disease and the sensitivity, specificity, and predictive values of 3 diagnostic tests for C. trachomatis infection. Estimates were obtained by using data collected before and after mass azithromycin administration. Such estimates are particularly important for trachoma because of the absence of a true “gold standard” diagnostic test for C. trachomatis. Estimated transition probabilities provide useful insights into key epidemiologic questions about the persistence of disease and the clearance of infection as well as the required frequency of surveillance in the postelimination setting.
机译:在疾病控制或消除计划中,诊断对于评估干预措施的影响,完善治疗策略并最大程度地减少稀缺资源的浪费至关重要。尽管需要高性能的测试,但是提高准确性经常伴随着对更复杂基础架构的需求,而这在发展中国家通常是不可行的。这些挑战与沙眼消除计划中的制图,影响监测和监视有关。为帮助合理设计消灭沙眼的诊断方法,我们概述了一种非参数多级隐马尔可夫建模方法,并将其应用于坦桑尼亚(2000-2002年)和冈比亚(2001-2002年)的两个沙眼流行区纵向队列研究,以提供关于沙眼衣原体感染和疾病的真实人群患病率以及3种沙眼衣原体感染诊断测试的敏感性,特异性和预测价值的同时推断。使用大剂量阿奇霉素治疗前后收集的数据得出估算值。由于缺乏真正的沙眼衣原体“金标准”诊断测试,因此这种估计对于沙眼尤其重要。估计的过渡概率提供了关于疾病持续性和感染清除率以及在消除后环境中所需监视频率的关键流行病学问题的有用见解。

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