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Calcium Enhances Binding of Aβ Monomer to DMPC Lipid Bilayer

机译:钙增强Aβ单体与DMPC脂质双层的结合

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摘要

Using isobaric-isothermal replica-exchange molecular dynamics and the all-atom explicit-solvent model, we studied the equilibrium binding of Aβ monomers to a zwitterionic dimyristoylphosphatidylcholine (DMPC) bilayer coincubated with calcium ions. Using our previous replica-exchange molecular dynamics calcium-free simulations as a control, we reached three conclusions. First, calcium ions change the tertiary structure of the bound Aβ monomer by destabilizing several long-range intrapeptide interactions, particularly the salt bridge Asp23-Lys28. Second, calcium strengthens Aβ peptide binding to the DMPC bilayer by enhancing electrostatic interactions between charged amino acids and lipid polar headgroups. As a result, Aβ monomer penetrates deeper into the bilayer, making disorder in proximal lipids and bilayer thinning more pronounced. Third, because calcium ions demonstrate strong affinity to negatively charged amino acids, a considerable influx of calcium into the area proximal to the bound Aβ monomer is observed. Consequently, the localizations of negatively charged amino acids and calcium ions in the Aβ binding footprint overlap. Based on our data, we propose a mechanism by which calcium ions strengthen Aβ-bilayer interactions. This mechanism involves two factors: 1) calcium ions make the DMPC bilayer partially cationic and thus attractive to the anionic Aβ peptide; and 2) destabilization of the Asp23-Lys28 salt bridge makes Lys28 available for interactions with the bilayer. Finally, we conclude that a single Aβ monomer does not promote permeation of calcium ions through the zwitterionic bilayer.
机译:使用等压-等温复制-交换分子动力学和全原子显式溶剂模型,我们研究了Aβ单体与钙离子共孵育的两性离子二茂基磷脂酰胆碱(DMPC)双层的平衡结合。使用我们以前的副本交换分子动力学无钙模拟作为对照,我们得出了三个结论。首先,钙离子通过使几种长距离内肽相互作用特别是盐桥Asp 23 -Lys 28 不稳定来改变结合的Aβ单体的三级结构。其次,钙通过增强带电氨基酸和脂质极性头基之间的静电相互作用,增强Aβ肽与DMPC双层的结合。结果,Aβ单体更深地渗透到双层中,使得近端脂质的紊乱和双层变薄更加明显。第三,由于钙离子显示出对带负电荷的氨基酸的强亲和力,因此观察到大量钙流入结合的Aβ单体附近区域。因此,带负电荷的氨基酸和钙离子在Aβ结合足迹中的定位重叠。根据我们的数据,我们提出了钙离子增强Aβ-双层相互作用的机制。该机制涉及两个因素:1)钙离子使DMPC双层部分成为阳离子,因此对阴离子Aβ肽具有吸引力; 2)Asp 23 -Lys 28 盐桥的失稳使得Lys 28 可用于与双层的相互作用。最后,我们得出结论,单一的Aβ单体不会促进两性离子双层膜中钙离子的渗透。

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