首页> 美国卫生研究院文献>Biophysical Journal >A Matter of Life or Death: Modeling DNA Damage and Repair in Bacteria
【2h】

A Matter of Life or Death: Modeling DNA Damage and Repair in Bacteria

机译:生死攸关的问题:模拟细菌中的DNA损伤和修复

代理获取
本网站仅为用户提供外文OA文献查询和代理获取服务,本网站没有原文。下单后我们将采用程序或人工为您竭诚获取高质量的原文,但由于OA文献来源多样且变更频繁,仍可能出现获取不到、文献不完整或与标题不符等情况,如果获取不到我们将提供退款服务。请知悉。

摘要

DNA damage is a hazard all cells must face, and evolution has created a number of mechanisms to repair damaged bases in the chromosome. Paradoxically, many of these repair mechanisms can create double-strand breaks in the DNA molecule which are fatal to the cell. This indicates that the connection between DNA repair and death is far from straightforward, and suggests that the repair mechanisms can be a double-edged sword. In this report, we formulate a mathematical model of the dynamics of DNA damage and repair, and we obtain analytical expressions for the death rate. We predict a counterintuitive relationship between survival and repair. We can discriminate between two phases: below a critical threshold in the number of repair enzymes, the half-life decreases with the number of repair enzymes, but becomes independent of the number of repair enzymes above the threshold. We are able to predict quantitatively the dependence of the death rate on the damage rate and other relevant parameters. We verify our analytical results by simulating the stochastic dynamics of DNA damage and repair. Finally, we also perform an experiment with Escherichia coli cells to test one of the predictions of our model.
机译:DNA损伤是所有细胞都必须面对的危险,进化形成了许多机制来修复染色体中受损的碱基。矛盾的是,这些修复机制中的许多机制都可能在DNA分子中产生双链断裂,这对细胞是致命的。这表明DNA修复与死亡之间的联系远非直截了当,并表明修复机制可能是一把双刃剑。在本报告中,我们建立了DNA损伤和修复动力学的数学模型,并获得了死亡率的分析表达式。我们预测生存与修复之间存在反常的关系。我们可以区分两个阶段:修复酶的数量低于临界阈值时,半衰期随修复酶的数量而减少,但与阈值以上的修复酶的数量无关。我们能够定量地预测死亡率对伤害率和其他相关参数的依赖性。我们通过模拟DNA损伤和修复的随机动力学来验证我们的分析结果。最后,我们还对大肠杆菌细胞进行了实验,以测试模型的预测之一。

著录项

相似文献

  • 外文文献
  • 中文文献
  • 专利
代理获取

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号