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A Combination of Multisite Phosphorylation and Substrate Sequestration Produces Switchlike Responses

机译:多位磷酸化和底物螯合的组合产生类似开关的反应。

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摘要

The phosphorylation of a protein on multiple sites has been proposed to promote the switchlike regulation of protein activity. Recent theoretical work, however, indicates that multisite phosphorylation, by itself, is less effective at creating switchlike responses than had been previously thought. The phosphorylation of a protein often alters its spatial localization, or its association with other proteins, and this sequestration can alter the accessibility of the substrate to the relevant kinases and phosphatases. Sequestration thus has the potential to interact with multisite phosphorylation to modulate ultrasensitivity and threshold. Here, using simple ordinary differential equations to represent phosphorylation, dephosphorylation, and binding/sequestration, we demonstrate that the combination of multisite phosphorylation and regulated substrate sequestration can produce a response that is both a good threshold and a good switch. Several strategies are explored, including both stronger and weaker sequestration with successive phosphorylations, as well as combinations that are more elaborate. In some strategies, such as when phosphorylation and dephosphorylation are segregated, a near-optimal switch is possible, where the effective Hill number equals the number of phosphorylation sites.
机译:已经提出蛋白质在多个位点的磷酸化以促进蛋白质活性的开关样调节。然而,最近的理论工作表明,多位点磷酸化本身在产生开关样反应方面不如以前所认为的有效。蛋白质的磷酸化通常会改变其空间定位或与其他蛋白质的结合,而这种螯合会改变底物对相关激酶和磷酸酶的可及性。因此,螯合具有与多位磷酸化相互作用以调节超敏性和阈值的潜力。在这里,使用简单的常微分方程表示磷酸化,去磷酸化和结合/螯合,我们证明多位磷酸化和受调节的底物螯合相结合可以产生既是一个好的阈值又是一个好的转换的响应。探索了几种策略,包括更强和更弱的螯合以及连续的磷酸化,以及更精细的组合。在某些策略中,例如当磷酸化和去磷酸化分离时,可能发生接近最佳的转换,其中有效希尔数等于磷酸化位点的数目。

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