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Protein Shape and Crowding Drive Domain Formation and Curvature in Biological Membranes

机译:生物膜中蛋白质的形状和拥挤驱动结构域的形成和曲率

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摘要

Folding, curvature, and domain formation are characteristics of many biological membranes. Yet the mechanisms that drive both curvature and the formation of specialized domains enriched in particular protein complexes are unknown. For this reason, studies in membranes whose shape and organization are known under physiological conditions are of great value. We therefore conducted atomic force microscopy and polarized spectroscopy experiments on membranes of the photosynthetic bacterium Rhodobacter sphaeroides. These membranes are densely populated with peripheral light harvesting (LH2) complexes, physically and functionally connected to dimeric reaction center-light harvesting (RC-LH1-PufX) complexes. Here, we show that even when converting the dimeric RC-LH1-PufX complex into RC-LH1 monomers by deleting the gene encoding PufX, both the appearance of protein domains and the associated membrane curvature are retained. This suggests that a general mechanism may govern membrane organization and shape. Monte Carlo simulations of a membrane model accounting for crowding and protein geometry alone confirm that these features are sufficient to induce domain formation and membrane curvature. Our results suggest that coexisting ordered and fluid domains of like proteins can arise solely from asymmetries in protein size and shape, without the need to invoke specific interactions. Functionally, coexisting domains of different fluidity are of enormous importance to allow for diffusive processes to occur in crowded conditions.
机译:折叠,弯曲和结构域形成是许多生物膜的特征。然而,既驱动弯曲又富集特定蛋白质复合物的特化结构域的机制尚不清楚。因此,在生理条件下已知其形状和组织的膜的研究具有重要价值。因此,我们对光合细菌球形球形红细菌的膜进行了原子力显微镜和偏振光谱实验。这些膜密集地布满了外围光收集(LH2)复合物,在物理上和功能上与二聚反应中心光收集(RC-LH1-PufX)复合物相连。在这里,我们表明,即使通过删除编码PufX的基因将二聚体RC-LH1-PufX复合物转化为RC-LH1单体,蛋白质域的外观和相关的膜曲率也得以保留。这表明一般机制可以控制膜的组织和形状。仅考虑了拥挤和蛋白质几何形状的膜模型的蒙特卡洛模拟证实,这些特征足以诱导结构域形成和膜曲率。我们的结果表明,相似蛋白质的共存有序域和流体域可以仅由蛋白质大小和形状的不对称引起,而无需调用特定的相互作用。在功能上,具有不同流动性的共存域对于在拥挤条件下发生扩散过程具有极其重要的意义。

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