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Single-Channel Water Permeabilities of Escherichia coli Aquaporins AqpZ and GlpF

机译:大肠杆菌水通道蛋白AqpZ和GlpF的单通道水渗透性

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摘要

From equilibrium molecular dynamics simulations we have determined single-channel water permeabilities for Escherichia coli aquaporin Z (AqpZ) and aquaglyceroporin GlpF with the channels embedded in lipid bilayers. GlpF's osmotic water permeability constant pf exceeds by 2–3 times that of AqpZ and the diffusive permeability constant (pd) of GlpF is found to exceed that of AqpZ 2–9-fold. Achieving complete water selectivity in AqpZ consequently implies lower transport rates overall relative to the less selective, wider channel of GlpF. For AqpZ, the ratio pf/pd ≅ 12 is close to the average number of water molecules in the channel lumen, whereas for GlpF, pf/pd ≅ 4. This implies that single-file structure of the luminal water is more pronounced for AqpZ, the narrower channel of the two. Electrostatics profiles across the pore lumens reveal that AqpZ significantly reinforces water-channel interactions, and weaker water-water interactions in turn suppress water-water correlations relative to GlpF. Consequently, suppressed water-water correlations across the narrow selectivity filter become a key structural determinant for water permeation causing luminal water to permeate slower across AqpZ.
机译:通过平衡分子动力学模拟,我们确定了大肠杆菌水通道蛋白Z(AqpZ)和水甘油通道蛋白GlpF的单通道水渗透性,通道嵌入脂质双层中。 GlpF的渗透水渗透常数pf超过AqpZ的2-3倍,发现GlpF的扩散渗​​透常数(pd)超过AqpZ的2-9倍。因此,相对于GlpF选择性较差,较宽的通道,在AqpZ中实现完全的水选择性意味着总体运输速率较低。对于AqpZ,比率pf / pd≅12接近通道内腔中水分子的平均数,而对于GlpF,比率pf / pd≅4。这意味着对于AqpZ,腔内水的单文件结构更为明显。 ,两者的较窄渠道。整个孔腔的静电分布图表明,AqpZ显着增强了水通道相互作用,而较弱的水-水相互作用反过来又抑制了水-水相对于GlpF的相关性。因此,在狭窄的选择性过滤器上被抑制的水-水相关性成为水渗透的关键结构决定因素,导致管腔水在AqpZ上的渗透较慢。

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