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Theoretical description of the spatial dependence of sickle hemoglobin polymerization.

机译:镰状血红蛋白聚合反应的空间依赖性的理论描述。

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摘要

We have generalized the double nucleation mechanism of Ferrone et al. (Ferrone, F. A., J. Hofrichter, H. Sunshine, and W. A. Eaton. 1980. Biophys. J. 32:361-377; Ferrone, F. A., J. Hofrichter, and W. A. Eaton. 1985. J. Mol. Biol. 183:611-631) to describe the spatial dependence of the radial growth of polymer domains of sickle hemoglobin. Although this extended model requires the consideration of effects such as monomer diffusion, which are irrelevant to a spatially uniform description, no new adjustable parameters are required because diffusion constants are known independently. We find that monomer diffusion into the growing domain can keep the net unpolymerized monomer concentration approximately constant, and in that limit we present an analytic solution of the model. The model shows the features reported by Basak, S., F. A. Ferrone, and J. T. Wang (1988. Biophys J. 54:829-843) and provides a new means of determining the rate of polymer growth. When spatially integrated, the model exhibits the exponential growth seen in previous studies, although molecular parameters derived from analysis of the kinetics assuming uniformity must be modified in some cases to account for the spatially nonuniform growth. The model developed here can be easily adapted to any spatially dependent polymerization process.
机译:我们已经概括了Ferrone等人的双核机制。 (Ferrone,FA,J.Hofrichter,H.Sunshine和WAEaton.1980。Biophys.J.32:361-377; Ferrone,FA,J.Hofrichter和WAEaton.1985。J.Mol.Biol.183。 :611-631)来描述镰状血红蛋白的聚合物域的径向生长的空间依赖性。尽管此扩展模型需要考虑单体扩散等与空间均匀描述无关的影响,但由于扩散常数是独立已知的,因此不需要新的可调参数。我们发现单体扩散到生长域中可以使未聚合单体的净浓度保持近似恒定,在此范围内,我们提供了该模型的解析解。该模型显示了Basak,S.,F.A.Ferrone和J.T.Wang(1988.Biophys J.54:829-843)报道的特征,并提供了确定聚合物生长速率的新方法。当在空间上整合时,该模型显示出先前研究中看到的指数增长,尽管在某些情况下必须修改动力学(假设均匀性)得出的分子参数以解决空间上的不均匀增长。在此开发的模型可以轻松地适应任何空间相关的聚合过程。

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