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Distribution of Hepatitis C virus (HCV) genotypes in seropositive patients in the state of Alagoas Brazil

机译:巴西阿拉戈斯州血清阳性患者中的丙型肝炎病毒(HCV)基因型分布

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摘要

We determined the frequency of hepatitis C virus (HCV) genotypes in anti-HCV seropositive patients in the state of Alagoas, Brazil, by means of nested-reverse transcription-polymerase chain reaction (RT-nested-PCR) followed by restriction fragment length polymorphism (RFLP) of amplified fragments of the 5´NCR. The nested-PCR with genotype-specific primers from the core region was carried out when detection was not possible by the first approach. Detectable HCV-RNA was present in 115 (74.7%) of 154 serum samples. Genotype 1 was the most frequent (77.4%), against 20.9% of genotype 3 and 0.8% of genotype 2. Subtype 1b was predominant (65.2%), followed by subtypes 1a (8.7%), and 3a (6.1%). Coinfection (1a/3a) was detected in 0.8% of the samples. Indeed, there was no significant differences in the prevalence of genotype 1 compared to what has been obtained from anti-HCV seropositive patients from other locations in Brazil. Here we report for the first time the genotype 2 in the state of Alagoas.
机译:我们通过嵌套逆转录-聚合酶链反应(RT-nested-PCR),然后进行限制性片段长度多态性,确定了巴西阿拉戈斯州抗HCV血清反应阳性患者中丙型肝炎病毒(HCV)基因型的频率。 (RFLP)5´NCR的扩增片段。当第一种方法无法检测时,使用来自核心区域的基因型特异性引物进行巢式PCR。 154个血清样本中有115个(74.7%)存在可检测到的HCV-RNA。基因型1最常见(77.4%),而基因型3占20.9%,基因型2占0.8%。亚型1b最主要(65.2%),其次是亚型1a(8.7%)和3a(6.1%)。在0.8%的样品中检测到了共感染(1a / 3a)。实际上,与从巴西其他地区的抗HCV血清反应阳性患者获得的结果相比,基因型1的患病率没有显着差异。在这里,我们首次报告Alagoas州的基因型2。

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