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Combining two-dimensional gel electrophoresis and metabolomic data in support of dry-season survival in the two main species of the malarial mosquito Anopheles gambiae

机译:结合二维凝胶电泳和代谢组学数据以支持冈比亚疟疾的两个主要物种中干季生存

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摘要

In dry savannahs of West-Africa, the malarial mosquitoes of the Anopheles gambiae sensu stricto complex annually survive the harsh desiccating conditions of the dry season. However, the physiological and biochemical mechanisms underlying how these mosquitoes survive such desiccating conditions are still undefined, and controversial. In this context, we provide the first work examining both proteomic and metabolomic changes in the two molecular forms of A. gambiae s.s (M and S forms) experimentally exposed to the rainy and dry season conditions as they experience in the field. Protein abundances of the mosquitoes were measured using a two-dimensional fluorescence difference gel electrophoresis (2D DIGE) coupled with a matrix-assisted laser desorption/ionisation-time of flight (MALDI-TOF) and tandem mass spectrometry (MS) for protein identification. These assays were conducted by Applied Biomics (, Applied Biomics, Inc. Hayward, CA, USA), and the mass spectrometry proteomics data have been deposited to the ProteomeXchange Consortium () via the PRIDE partner repository with the dataset identifier PXD000294. The metabolomic analysis was conducted using both Acquity UPLC® system (for amino acid identification), and a gas-chromatography-mass spectrometry platform (for sugars identification). Metabolomic fingerprintings were assessed in the University of Rennes 1, UMR CNRS 6553 EcoBio (France). A detailed interpretation of the obtained data can be found in Hidalgo et al. (2014) (Journal of Insect Physiology (2014)).
机译:在西非的干旱大草原中,冈比亚按蚊(Anopheles gambiae sensustricto)的疟疾蚊子每年在干旱季节的严峻干燥条件下生存。然而,这些蚊子如何在这种干燥条件下生存的生理和生化机制仍未确定,并存在争议。在这种情况下,我们提供了第一项研究,即通过实验暴露于雨季和旱季条件下的冈比亚土壤杆菌的两种分子形式(M和S形式)的蛋白质组学和代谢组学变化,他们在田间经历了这种经历。使用二维荧光差异凝胶电泳(2D DIGE)结合基质辅助激光解吸/电离飞行时间(MALDI-TOF)和串联质谱(MS)来测量蚊子的蛋白丰度,以进行蛋白鉴定。这些测定法由Applied Biomics(美国加利福尼亚州海沃德,Applied Biomics,公司)进行,质谱蛋白质组学数据已通过PRIDE合作伙伴存储库以数据集标识符PXD000294存放到ProteomeXchange联盟。使用Acquity UPLC ®系统(用于氨基酸鉴定)和气相色谱-质谱联用平台(用于糖鉴定)进行代谢组学分析。代谢组学指纹图谱在雷恩大学1(UMR CNRS 6553 EcoBio(France))中进行评估。有关所获得数据的详细解释,请参见Hidalgo等人。 (2014)(《昆虫生理学杂志》(2014))。

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