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Comparative Proteome Analysis of Porcine Jejunum Tissues in Response to a Virulent Strain of Porcine Epidemic Diarrhea Virus and Its Attenuated Strain

机译:猪空肠组织对猪流行性腹泻病毒及其减毒株的毒力反应的比较蛋白质组学分析

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摘要

Porcine epidemic diarrhea virus (PEDV), a predominant cause of acute enteric infection, leads to severe dehydrating diarrhea and mortality in piglets all over the world. A virulent PEDV YN13 strain, isolated in our laboratory, was attenuated to yield an attenuated PEDV strain YN144. To better understand the pathogenesis mechanism and the virus-host interaction during infection with both PEDV YN13 and YN144 strains, a comparative proteomic analysis was carried out to investigate the proteomic changes produced in the primary target organ, using isobaric tags for relative and absolute quantitation (iTRAQ) labeling, followed by liquid chromatography tandem-mass spectrometry (LC-MS/MS). A total of 269 and 301 differently expressed proteins (DEPs) were identified in the jejunum tissues of the piglets inoculated with YN13 and YN144, respectively. Bioinformatics analysis revealed that these proteins were involved in stress responses, signal transduction, and the immune system. All of these involved interferon-stimulated genes (ISGs) which were up-regulated in jejunums by both of the PEDV-infected groups. Based on the comparative analysis, we proposed that different changes induced by YN13 and YN144 in heterogeneous nuclear ribonucleoprotein A1 (hnRNPA1), eukaryotic initiation factor 4G1 (eIF4G1), and some members in the heat shock protein (HSP) family, may be responsible for differences in their pathogenicity.
机译:猪流行性腹泻病毒(PEDV)是急性肠感染的主要原因,它导致严重的脱水性腹泻和全世界仔猪的死亡。在我们实验室中分离出的强毒PEDV YN13菌株被减毒以产生减毒的PEDV菌株YN144。为了更好地了解PEDV YN13和YN144菌株在感染过程中的发病机理和病毒-宿主相互作用,我们进行了比较蛋白质组学分析,使用同量异位标签进行相对和绝对定量研究主要靶器官中产生的蛋白质组变化( iTRAQ)标记,然后进行液相色谱串联质谱(LC-MS / MS)。在分别接种了YN13和YN144的仔猪的空肠组织中共鉴定出269和301种不同表达的蛋白质(DEP)。生物信息学分析表明,这些蛋白质与应激反应,信号转导和免疫系统有关。所有这些都涉及被PEDV感染的两组在空肠中上调的干扰素刺激基因(ISG)。在比较分析的基础上,我们提出由YN13和YN144诱导的异核核糖核蛋白A1(hnRNPA1),真核起始因子4G1(eIF4G1)和热休克蛋白(HSP)家族的某些成员的不同变化可能是造成这种情况的原因。其致病性差异。

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