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The complete genome sequence and analysis of a plasmid-bearing myxobacterial strain Myxococcus fulvus 124B02 (M 206081)

机译:带有质粒的黏细菌菌株Myxococcus fulvus 124B02(M 206081)的完整基因组序列和分析

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摘要

Myxobacteria, phylogenetically located in the delta division of the Proteobacteria, are well known for characterized social behaviors and large genomes of more than 9 Mb in size. Myxococcus fulvus is a typical species of the genus Myxococcus in the family Myxococcaceae. M. fulvus 124B02, originally isolated from a soil sample collected in Northeast China, is the one and only presently known myxobacterial strain that harbors an endogenous autonomously replicating plasmid, named pMF1. The endogenous plasmid is of importance for understanding the genome evolution of myxobacteria, as well as for the development of genetic engineering tools in myxobacteria. Here we describe the complete genome sequence of this organism. M. fulvus 124B02 consists of a circular chromosome with a total length of 11,048,835 bp and a circular plasmid of 18,634 bp. Comparative genomic analyses suggest that pMF1 has a longstanding sustention within myxobacteria, and probably contributes to the genome expansion of myxobacteria.Electronic supplementary materialThe online version of this article (doi:10.1186/s40793-015-0121-y) contains supplementary material, which is available to authorized users.
机译:粘细菌在系统发育上位于Proteobacteria的三角区,以其特征性的社交行为和大小超过9 Mb的大型基因组而闻名。 fulxococcus fulvus是粘球菌科中Myxococcus属的典型物种。 fulvus 124B02最初是从中国东北地区收集的土壤样品中分离的,是目前唯一已知的带有内源性自主复制质粒pMF1的黏细菌菌株。内源质粒对于理解粘细菌的基因组进化以及粘细菌的基因工程工具的开发很重要。在这里,我们描述了这种生物的完整基因组序列。 fulvus 124B02由一个全长为11,048,835 bp的环状染色体和一个18,634 bp的环状质粒组成。比较的基因组分析表明pMF1在黏菌中具有很长的持续时间,可能有助于黏菌的基因组扩展。电子补充材料本文的在线版本(doi:10.1186 / s40793-015-0121-y)包含补充材料,可供授权用户使用。

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