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Electrostatic origin of the unidirectionality of walking myosin V motors

机译:行走肌球蛋白V电机单向性的静电起源

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摘要

Understanding the basis for the action of myosin motors and related molecular machines requires a quantitative energy-based description of the overall functional cycle. Previous theoretical attempts to do so have provided interesting insights on parts of the cycle but could not generate a structure-based free energy landscape for the complete cycle of myosin. In particular, a nonphenomenological structure/energy-based understanding of the unidirectional motion is still missing. Here we use a coarse-grained model of myosin V and generate a structure-based free energy surface of the largest conformational change, namely the transition from the post- to prepowerstroke movement. We also couple the observed energetics of ligand binding/hydrolysis and product release to that of the conformational surface and reproduce the energetics of the complete mechanochemical cycle. It is found that the release in electrostatic free energy upon changing the conformation of the lever arm and the convertor domain from its post- to prepowerstroke state provides the necessary energy to bias the system towards the unidirectional movement of myosin V on the actin filament. The free energy change of 11 kcal is also in the range of ∼2–3 pN, which is consistent with the experimentally observed stalling force required to stop the motor completely on its track. The conformational-chemical coupling generating a successful powerstroke cycle is believed to be conserved among most members of the myosin family, thus highlighting the importance of the previously unknown role of electrostatics free energy in guiding the functional cycle in other actin-based myosin motors.
机译:了解肌球蛋白电机和相关分子机器的作用基础需要对整个功能周期进行基于能量的定量描述。以前的理论尝试这样做提供了关于周期的某些部分的有趣见解,但无法为肌球蛋白的整个周期生成基于结构的自由能态势。特别是,仍然缺少对单向运动的基于非现象学结构/能量的理解。在这里,我们使用肌球蛋白V的粗粒模型,并生成最大构象变化(即从中风后运动到中风后运动的过渡)的基于结构的自由能表面。我们还将所观察到的配体结合/水解和产物释放的能量与构象表面的能量耦合,并复制了完整机械化学循环的能量。已经发现,通过将杠杆臂和转换器区域的构型从动力后状态改变到动力前状态,释放静电自由能提供了必要的能量,以使系统偏向肌动蛋白V在肌动蛋白丝上的单向运动。 11 kcal的自由能变化也在2-3 pN的范围内,这与实验观察到的使电动机完全停止在其轨道上所需的失速力一致。据信在肌球蛋白家族的大多数成员中保守了产生成功的中风循环的构象-化学偶联,因此突出了静电自由能在指导其他基于肌动蛋白的肌球蛋白电动机的功能循环中的未知作用。

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