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Geometric and electronic structure differences between the type 3 copper sites of the multicopper oxidases and hemocyanin/tyrosinase

机译:多铜氧化酶的3型铜位与血蓝蛋白/酪氨酸酶之间的几何和电子结构差异

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摘要

The coupled binuclear “type 3” Cu sites are found in hemocyanin (Hc), tyrosinase (Tyr), and the multicopper oxidases (MCOs), such as laccase (Lc), and play vital roles in O2 respiration. Although all type 3 Cu sites share the same ground state features, those of Hc/Tyr have very different ligand-binding properties relative to those of the MCOs. In particular, the type 3 Cu site in the MCOs (LcT3) is a part of the trinuclear Cu cluster, and if the third (i.e., type 2) Cu is removed, the LcT3 site does not react with O2. Density functional theory calculations indicate that O2 binding in Hc is ≈9 kcal mol−1 more favorable than for LcT3. The difference is mostly found in the total energy difference of the deoxy states (≈7 kcal mol−1), where the stabilization of deoxy LcT3 derives from its long equilibrium Cu–Cu distance of ≈5.5–6.5 Å, relative to ≈4.2 Å in deoxy Hc/Tyr. The O2 binding in Hc is driven by the electrostatic destabilization of the deoxy Hc site, in which the two Cu(I) centers are kept close together by the protein for facile 2-electron reduction of O2. Alternatively, the lack of O2 reactivity in LcT3 reflects the flexibility of the active site, capable of minimizing the electrostatic repulsion of the 2 Cu(I)s. Thus, the O2 reactivity of the MCOs is intrinsic to the trinuclear Cu cluster, leading to different O2 intermediates as required by its function of irreversible reduction of O2 to H2O.
机译:耦合的双核“ 3型”铜位点存在于血蓝蛋白(Hc),酪氨酸酶(Tyr)和多铜氧化酶(MCO)(例如漆酶(Lc))中,并在O2呼吸中起重要作用。尽管所有3型Cu位点都具有相同的基态特征,但Hc / Tyr的位点与MCO的位点具有非常不同的配体结合特性。特别是,MCO中的3型Cu位点(Lc T3 )是三核Cu簇的一部分,如果去除了第三个(即2型)Cu,则Lc T3 站点不与O2反应。密度泛函理论计算表明,Hc中的O2结合比Lc T3 好约≈9 kcal mol -1 。这种差异主要存在于脱氧态的总能量差(≈7kcal mol -1 )中,其中脱氧Lc T3 的稳定来自其长的平衡铜–Cu距离≈5.5–6.5Å,相对于脱氧Hc / Tyr中的≈4.2Å。 Hc中的O2结合是由脱氧Hc位点的静电去稳定作用驱动的,在该位点,两个Cu(I)中心被蛋白质保持在一起,以便于O2的2电子还原。另外,Lc T3 中缺少O2反应性反映了活性位点的灵活性,能够使2个Cu(I)的静电排斥最小。因此,MCO的O2反应性是三核Cu团簇固有的,导致其O2不可还原地还原为H2O所需要的O2中间体。

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