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Restriction of Amino Acid Change in Influenza A Virus H3HA: Comparison of Amino Acid Changes Observed in Nature and In Vitro

机译:甲型流感病毒H3HA中氨基酸变化的限制:自然界和体外观察到的氨基酸变化的比较

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摘要

We introduced 248 single-point amino acid changes into hemagglutinin (HA) protein of the A/Aichi/2/68 (H3N2) strain by a PCR random mutation method. These changes were classified as positive or negative according to their effect on hemadsorption activity. We observed following results. (i) The percentage of surviving amino acid changes on the HA1 domain that did not abrogate hemadsorption activity was calculated to be ca. 44%. In nature, it is estimated to be ca. 39.6%. This difference in surviving amino acid changes on the HA protein between natural isolates and in vitro mutants might be due to the immune pressure against the former. (ii) A total of 26 amino acid changes in the in vitro mutants matched those at which mainstream amino acid changes had occurred in the H3HA1 polypeptide from 1968 to 2000. Of these, 25 were positive. We suggest that the majority of amino acid changes on the HA protein during evolution might be restricted to those that were positive on the HA of A/Aichi/2/68. (iii) We constructed two-point amino acid changes on the HA protein by using positive mutants. These two-point amino acid changes with a random combination did not inhibit hemadsorption activity. It is possible that an accumulation of amino acid change might occur without order. (iv) From the analysis of amino acids participating in mainstream amino acid change, each antigenic site could be further divided into smaller sites. The amino acid substitutions in the gaps between these smaller sites resulted in mostly hemadsorption-negative changes. These gap positions may play an important role in maintaining the function of the HA protein, and therefore amino acid changes are restricted at these locations.
机译:我们通过PCR随机突变方法将248个单点氨基酸变化引入A / Aichi / 2/68(H3N2)菌株的血凝素(HA)蛋白中。根据这些变化对吸血活性的影响,可分为正变化或负变化。我们观察到以下结果。 (i)在HA1结构域上存活的氨基酸变化的百分比的未消除的血液吸收活性被计算为约。 44%。在自然界中,估计约为39.6%。天然分离物和体外突变体之间HA蛋白存活氨基酸变化的这种差异可能是由于针对前者的免疫压力所致。 (ii)体外突变体中共有26个氨基酸变化与1968年至2000年H3HA1多肽中主流氨基酸变化发生的突变相符。其中25个为阳性。我们建议进化过程中HA蛋白上的大多数氨基酸变化可能仅限于对A / Aichi / 2/68的HA呈阳性的氨基酸变化。 (iii)我们使用阳性突变体在HA蛋白上构建了两点氨基酸变化。随机组合的这些两点氨基酸变化不会抑制血液吸收活性。氨基酸变化的积累可能会无序发生。 (iv)通过分析参与主流氨基酸变化的氨基酸,可以将每个抗原位点进一步分成较小的位点。这些较小位点之间的间隙中的氨基酸取代导致大部分血吸附负性变化。这些间隙位置在维持HA蛋白的功能中可能起重要作用,因此氨基酸变化被限制在这些位置。

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