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Analysis of Proteins Associated with Quality Deterioration of Grouper Fillets Based on TMT Quantitative Proteomics during Refrigerated Storage

机译:基于TMT定量蛋白质组学的冷藏过程中与石斑鱼片质量下降相关的蛋白质分析

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摘要

A TMT (Tandem Mass Tag)-based strategy was applied to elucidate proteins that change in proteomes of grouper fillets during refrigerated storage. In addition, quality analyses on pH, centrifugal loss, color (L *, a *, b *) and texture (hardness, chewiness, and gumminess) for grouper fillets were performed. A total of 64 differentially significant expressed proteins (DSEPs) were found in the results in the Day 0 vs. Day 6 group comparison and the Day 0 vs. Day 12 group comparison. It is worth mentioning that more proteome changes were found in the Day 0 vs. Day 12 comparisons. Bioinformatics was utilized to analyze the DSEP. UniProt Knowledgebase (UniProtKB), Gene Ontology (GO) enrichment, Kyoto Encyclopedia of Genes and Genomes (KEGG) and protein interaction network analysis were adopted. All DSEPs were classified into seven areas by function: binding proteins, calcium handling, enzymes, heat shock protein, protein turnover, structural proteins and miscellaneous. The numbers of proteins that correlated closely with pH, centrifugal loss, color (L *, a *, b *) and texture (hardness, chewiness, and gumminess) were 4, 3, 6 and 8, respectively.
机译:基于TMT(串联质量标签)的策略用于阐明在冷藏过程中石斑鱼片蛋白质组中变化的蛋白质。此外,对石斑鱼片的pH,离心损失,颜色(L *,a *,b *)和质地(硬度,耐嚼性和胶粘性)进行了质量分析。在第0天与第6天组的比较以及第0天与第12天组的比较的结果中,总共发现了64种差异显着表达的蛋白质(DSEP)。值得一提的是,在第0天与第12天的比较中发现了更多的蛋白质组变化。生物信息学被用来分析DSEP。采用UniProt知识库(UniProtKB),基因本体论(GO)富集,京都市基因与基因组百科全书(KEGG)和蛋白质相互作用网络分析。所有DSEP均按功能分为七个领域:结合蛋白,钙处理,酶,热休克蛋白,蛋白更新,结构蛋白和其他。与pH,离心损失,颜色(L *,a *,b *)和质地(硬度,耐嚼性和胶粘性)紧密相关的蛋白质数量分别为4、3、6和8。

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