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Quantitative Assessment of Histone H2B Monoubiquitination in Yeast Using Immunoblotting

机译:使用免疫印迹定量评估酵母中组蛋白 H2B 单泛素化

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摘要

Studies in Saccharomyces cerevisiae and Schizosaccharomyces pombe have enhanced our understanding of the regulation and functions of histone H2B monoubiquitination (H2Bub1), a key epigenetic marker with important roles in transcription and other processes. The detection of H2Bub1 in yeasts using immunoblotting has been greatly facilitated by the commercial availability of antibodies against yeast histone H2B and the cross-reactivity of an antibody raised against monoubiquitinated human H2BK120. These antibodies have obviated the need to express epitope-tagged histone H2B to detect H2Bub1 in yeasts. Here, we provide a step-by-step protocol and best practices for the quantification of H2Bub1 in yeast systems, from cell extract preparation to immunoblotting using the commercially available antibodies. We demonstrate that the commercial antibodies can effectively and accurately detect H2Bub1 in S. cerevisiae and S. pombe. Further, we show that the C-terminal epitope-tagging of histone H2B alters the steady-state levels of H2Bub1 in yeast systems. We report a sectioned blot probing approach combined with the serial dilution of protein lysates and the use of reversibly stained proteins as loading controls that together provide a cost-effective and sensitive method for the quantitative evaluation of H2Bub1 in yeast.
机译:对酿酒酵母和粟酒裂殖酵母的研究增强了我们对组蛋白 H2B 单泛素化 (H2Bub1) 的调节和功能的理解,H2Bub1 是一种在转录和其他过程中具有重要作用的关键表观遗传标志物。使用免疫印迹法检测酵母中 H2Bub1 的商业化得益于酵母组蛋白 H2B 抗体的商业化可用性和针对单泛素化人 H2Bub 的抗体的交叉反应性H2BK120。这些抗体消除了表达表位标记的组蛋白 H2B 来检测酵母中 H2Bub1 的需要。在这里,我们提供了从细胞提取物制备到使用市售抗体进行免疫印迹的酵母系统中 H2Bub1 定量的分步方案和最佳实践。我们证明市售抗体可以有效准确地检测酿酒酵母和粟酒链球菌中的 H2Bub1。此外,我们表明组蛋白 H2B 的 C 末端表位标记改变了酵母系统中 H2Bub1 的稳态水平。我们报道了一种切片印迹探测方法,结合蛋白质裂解物的连续稀释和使用可逆染色的蛋白质作为上样对照,它们共同为定量评估酵母中 H2Bub1 提供了一种经济高效且灵敏的方法。

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