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Characterization of a GHF45 cellulase AkEG21 from the common sea hare Aplysia kurodai

机译:来自常见海兔Aplysia kurodai的GHF45纤维素酶AkEG21的表征

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摘要

The common sea hare Aplysia kurodai is known to be a good source for the enzymes degrading seaweed polysaccharides. Recently four cellulases, i.e., 95, 66, 45, and 21 kDa enzymes, were isolated from A. kurodai (Tsuji et al., ). The former three cellulases were regarded as glycosyl-hydrolase-family 9 (GHF9) enzymes, while the 21 kDa cellulase was suggested to be a GHF45 enzyme. The 21 kDa cellulase was significantly heat stable, and appeared to be advantageous in performing heterogeneous expression and protein-engineering study. In the present study, we determined some enzymatic properties of the 21 kDa cellulase and cloned its cDNA to provide the basis for the protein engineering study of this cellulase. The purified 21 kDa enzyme, termed AkEG21 in the present study, hydrolyzed carboxymethyl cellulose with an optimal pH and temperature at 4.5 and 40°C, respectively. AkEG21 was considerably heat-stable, i.e., it was not inactivated by the incubation at 55°C for 30 min. AkEG21 degraded phosphoric-acid-swollen cellulose producing cellotriose and cellobiose as major end products but hardly degraded oligosaccharides smaller than tetrasaccharide. This indicated that AkEG21 is an endolytic β-1,4-glucanase (EC 3.2.1.4). A cDNA of 1013 bp encoding AkEG21 was amplified by PCR and the amino-acid sequence of 197 residues was deduced. The sequence comprised the initiation Met, the putative signal peptide of 16 residues for secretion and the catalytic domain of 180 residues, which lined from the N-terminus in this order. The sequence of the catalytic domain showed 47–62% amino-acid identities to those of GHF45 cellulases reported in other mollusks. Both the catalytic residues and the N-glycosylation residues known in other GHF45 cellulases were conserved in AkEG21. Phylogenetic analysis for the amino-acid sequences suggested the close relation between AkEG21 and fungal GHF45 cellulases.
机译:众所周知,常见的海兔黑ly Aplysia kurodai是降解海藻多糖的酶的良好来源。最近,从黑曲霉中分离出四种纤维素酶,即95、66、45和21kDa酶(Tsuji等,)。前三个纤维素酶被认为是糖基水解酶家族9(GHF9)酶,而21 kDa纤维素酶被认为是GHF45酶。 21 kDa纤维素酶具有明显的热稳定性,在进行异源表达和蛋白质工程研究方面似乎具有优势。在本研究中,我们确定了21 kDa纤维素酶的某些酶学性质,并克隆了其cDNA,从而为该纤维素酶的蛋白质工程研究提供了基础。纯化的21 kDa酶(在本研究中称为AkEG21)水解了分别在4.5和40°C时具有最佳pH和温度的羧甲基纤维素。 AkEG21具有相当高的热稳定性,即在55°C孵育30分钟后并未使其灭活。 AkEG21降解了磷酸溶胀的纤维素,产生了纤维三糖和纤维二糖,这是主要的最终产物,但几乎不降解小于四糖的寡糖。这表明AkEG21是一种内切性β-1,4-葡聚糖酶(EC 3.2.1.4)。通过PCR扩增出编码AkEG21的1013bp的cDNA,推导了197个残基的氨基酸序列。该序列包括起始Met,用于分泌的16个残基的推定信号肽和180个残基的催化结构域,其按此顺序从N末端排列。催化域的序列与其他软体动物中报道的GHF45纤维素酶的氨基酸同一性为47-62%。在其他GHF45纤维素酶中已知的催化残基和N-糖基化残基均在AkEG21中保守。氨基酸序列的系统进化分析表明,AkEG21与真菌GHF45纤维素酶之间存在密切关系。

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