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Concordant Genetic Estimators of Migration Reveal Anthropogenically Enhanced Source-Sink Population Structure in the River Sculpin Cottus gobio

机译:迁徙的协和遗传估计揭示了人为增强的库尔图斯河Sculpin河源库结构

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摘要

River systems are vulnerable to natural and anthropogenic habitat fragmentation and will often harbor populations deviating markedly from simplified theoretical models. We investigated fine-scale population structure in the sedentary river fish Cottus gobio using microsatellites and compared migration estimates from three FST estimators, a coalescent maximum-likelihood method and Bayesian recent migration analyses. Source-sink structure was evident via asymmetry in migration and genetic diversity with smaller upstream locations emigration biased and larger downstream subpopulations immigration biased. Patterns of isolation by distance suggested that the system was largely, but not entirely, in migration-drift equilibrium, with headwater populations harboring a signal of past colonizations and in some cases also recent population bottlenecks. Up- vs. downstream asymmetry in population structure was partly attributable to the effects of flow direction, but was enhanced by weirs prohibiting compensatory upstream migration. Estimators of migration showed strong correspondence, at least in relative terms, especially if pairwise FST was used as an indirect index of relative gene flow rather than being translated to Nm. Since true parameter values are unknown in natural systems, comparisons among estimators are important, both to determine confidence in estimates of migration and to validate the performance of different methods.
机译:河流系统容易受到自然和人为栖息地破碎的影响,往往会掩盖明显偏离简化理论模型的人口。我们使用微卫星调查了久坐的河鱼科蒂斯戈比奥的小规模种群结构,并比较了三个FST估计器,聚结最大似然法和贝叶斯最近迁移分析的迁移估计。通过不对称的迁移和遗传多样性可以明显看出源库结构,其中较小的上游位置偏向偏向上游,较大的下游亚群偏向于偏向。按距离隔离的模式表明,该系统在很大程度上是但不是全部处于迁移漂移均衡状态,源头种群带有过去殖民化的信号,在某些情况下还具有近期种群的瓶颈。种群结构的上下游不对称部分归因于流动方向的影响,但由于堰坝阻止补偿性上游迁移而加剧。迁移的估计值至少在相对方面表现出很强的对应性,尤其是如果成对的FST被用作相对基因流的间接指标而不是被翻译成Nm的话。由于在自然系统中未知真实参数值,因此估算器之间的比较非常重要,这对于确定对迁移量的估计值的信心以及验证不同方法的性能都非常重要。

著录项

  • 期刊名称 Genetics
  • 作者

    B. Hänfling; D. Weetman;

  • 作者单位
  • 年(卷),期 2006(173),3
  • 年度 2006
  • 页码 1487–1501
  • 总页数 15
  • 原文格式 PDF
  • 正文语种
  • 中图分类 遗传学;
  • 关键词

  • 入库时间 2022-08-17 12:09:34

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