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Cryo-EM structure of SRP68/72 reveals an extended dimerization domain with RNA-binding activity

机译:SRP68/72 的冷冻电镜结构揭示了具有 RNA 结合活性的扩展二聚化结构域

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摘要

The signal recognition particle (SRP) is a critical component in protein sorting pathways in all domains of life. Human SRP contains six proteins bound to the 7S RNA and their structures and functions have been mostly elucidated. The SRP68/72 dimer is the largest SRP component and is essential for SRP function. Although the structures of the SRP68/72 RNA binding and dimerization domains have been previously reported, the structure and function of large portions of the SRP68/72 dimer remain unknown. Here, we analyse full-length SRP68/72 using cryo-EM and report that SRP68/72 depend on each other for stability and form an extended dimerization domain. This newly observed dimerization domain is both a protein- and RNA-binding domain. Comparative analysis with current structural models suggests that this dimerization domain undergoes dramatic translocation upon SRP docking onto SRP receptor and eventually comes close to the Alu domain. We propose that the SRP68/72 dimerization domain functions by binding and detaching the Alu domain and SRP9/14 from the ribosomal surface, thus releasing elongation arrest upon docking onto the ER membrane.
机译:信号识别颗粒 (SRP) 是生命所有领域中蛋白质分选途径的关键组成部分。人 SRP 包含与 7S RNA 结合的 6 种蛋白质,它们的结构和功能已基本阐明。SRP68/72 二聚体是最大的 SRP 组分,对 SRP 功能至关重要。尽管先前已经报道了 SRP68/72 RNA 结合和二聚化结构域的结构,但大部分 SRP68/72 二聚体的结构和功能仍然未知。在这里,我们使用冷冻电镜分析全长 SRP68/72,并报告 SRP68/72 相互依赖以获得稳定性并形成扩展的二聚化结构域。这个新观察到的二聚化结构域既是蛋白质结合结构域,也是 RNA 结合结构域。与当前结构模型的比较分析表明,该二聚化结构域在 SRP 对接到 SRP 受体后发生剧烈易位,并最终接近 Alu 结构域。我们提出 SRP68/72 二聚化结构域通过结合并从核糖体表面分离 Alu 结构域和 SRP9/14 来发挥作用,从而在对接到 ER 膜上时释放伸长阻滞。

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