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RNA-Seq Study of Microbially Induced Hemocyte Transcripts from Larval Heliothis virescens (Lepidoptera: Noctuidae)

机译:幼虫Heliothis virescens(鳞翅目:夜蛾科)的微生物诱导的血细胞转录本的RNA-Seq研究

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摘要

Larvae of the tobacco budworm are major polyphagous pests throughout the Americas. Development of effective microbial biopesticides for this and related noctuid pests has been stymied by the natural resistance mediated innate immune response. Hemocytes play an early and central role in activating and coordinating immune responses to entomopathogens. To approach this problem we completed RNA-seq expression profiling of hemocytes collected from larvae following an in vivo challenge with bacterial and fungal cell wall components to elicit an immune response. A de novo exome assembly was constructed by combination of sequence tags from all treatments. Sequence tags from each treatment were aligned separately with the assembly to measure expression. The resulting table of differential expression had >22,000 assemblies each with a distinct combination of annotation and expression. Within these assemblies >1,400 were upregulated and >1,500 downregulated by immune activation with bacteria or fungi. Orthologs to innate immune components of other insects were identified including pattern recognition, signal transduction pathways, antimicrobial peptides and enzymes, melanization and coagulation. Additionally orthologs of components regulating hemocytic functions such as autophagy, apoptosis, phagocytosis and nodulation were identified. Associated cellular oxidative defenses and detoxification responses were identified providing a comprehensive snapshot of the early response to elicitation.
机译:烟草蠕虫的幼虫是整个美洲的主要多食性害虫。自然抵抗力介导的先天免疫反应阻碍了针对这种及相关夜蛾害虫的有效微生物杀虫剂的开发。血细胞在激活和协调对昆虫病原体的免疫反应中起着早期和中心作用。为了解决这个问题,我们在体内用细菌和真菌细胞壁成分激发免疫应答后,完成了从幼虫收集的血细胞的RNA-seq表达谱分析。通过组合来自所有处理的序列标签构建从头外显子组。将来自每种处理的序列标签与装配体分别比对以测量表达。所得的差异表达表具有> 22,000个程序集,每个程序集都具有注释和表达的不同组合。在这些组件中,通过细菌或真菌的免疫激活上调了1,400多个,下调了1,500多个。鉴定到其他昆虫先天免疫成分的直向同源物,包括模式识别,信号转导途径,抗菌肽和酶,黑色素化和凝血。另外,还鉴定了调节血细胞功能如自噬,凋亡,吞噬作用和结节的成分的直系同源物。确定了相关的细胞氧化防御和解毒反应,提供了对诱发早期反应的全面快照。

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