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Baculovirus Induced Transcripts in Hemocytes from the Larvae of Heliothis virescens

机译:杆状病毒诱导的Heliothis virescens幼虫血细胞中的转录本

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摘要

Using RNA-seq digital difference expression profiling methods, we have assessed the gene expression profiles of hemocytes harvested from Heliothis virescens that were challenged with Helicoverpa zea single nucleopolyhedrovirus (HzSNPV). A reference transcriptome of hemocyte-expressed transcripts was assembled from 202 million 42-base tags by combining the sequence data of all samples, and the assembled sequences were then subject to BLASTx analysis to determine gene identities. We used the fully sequenced HzSNPV reference genome to align 477,264 Illumina sequence tags from infected hemocytes in order to document expression of HzSNPV genes at early points during infection. A comparison of expression profiles of control insects to those lethally infected with HzSNPV revealed differential expression of key cellular stress response genes and genes involved in lipid metabolism. Transcriptional regulation of specific insect hormones in baculovirus-infected insects was also altered. A number of transcripts bearing homology to retroviral elements that were detected add to a growing body of evidence for extensive invasion of errantiviruses into the insect genome. Using this method, we completed the first and most comprehensive gene expression survey of both baculoviral infection and host immune defense in lepidopteran larvae.
机译:使用RNA序列数字差异表达谱分析方法,我们评估了从Heliothis virescens收获的血细胞的基因表达谱,这些血细胞受到Helicoverpa zea单核多角体病毒(HzSNPV)的攻击。通过结合所有样品的序列数据,从2.02亿个42个碱基的标签中组装出血细胞表达的转录本的参考转录组,然后对组装后的序列进行BLASTx分析,以确定基因的同一性。我们使用完全测序的HzSNPV参考基因组从受感染的血细胞中排列了477,264个Illumina序列标签,以记录在感染过程中早期点处HzSNPV基因的表达。将对照昆虫的表达谱与致死性感染HzSNPV的昆虫进行比较,发现关键细胞应激反应基因和参与脂质代谢的基因表达差异。杆状病毒感染昆虫中特定昆虫激素的转录调控也发生了变化。大量与逆转录病毒元件具有同源性的转录物被发现,这增加了越来越大的证据表明埃雷迪病毒广泛侵入昆虫基因组。使用这种方法,我们完成了鳞翅目幼虫杆状病毒感染和宿主免疫防御的第一个也是最全面的基因表达调查。

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