首页> 外文学位 >Insights into the in vitro replication of the lamivudine-resistant mutant, rtM204I, using the HBV recombinant baculovirus system in HepG2 cells.
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Insights into the in vitro replication of the lamivudine-resistant mutant, rtM204I, using the HBV recombinant baculovirus system in HepG2 cells.

机译:使用HepG2细胞中的HBV重组杆状病毒系统深入了解拉米夫定抗性突变体rtM204I的体外复制。

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摘要

Initial studies of this Dissertation focus on the replication of the precore (PC) and lamivudine-resistant rtM204I mutant of hepatitis B virus (HBV). During the first five days post-transduction, the rtM204I mutant replicates to levels comparable to WT HBV, in contrast to previous reports suggesting that the rtM204I mutant has a severe defect in replication compared to WT HBV. However, by day 10 post-transduction, rtM204I levels of intra- and extracellular HBV DNA were markedly reduced compared to WT HBV. Although the rtM204I mutation reduced production of HBV replicative intermediates, no effect on the levels of covalently closed circular DNA or HBV transcripts was observed at late time points. Cotransduction studies with different ratios of WT and rtM204I baculovirus show that rtM204I does not produce a product that inhibited HBV replication. However, the combination of WT and rtM204I yielded HBV DNA levels at late time points greater than WT alone, suggesting that WT polymerase may function in trans to boost rtM204I replication. Collectively, the data demonstrate that the rtM204I mutation generates a polymerase that is not only resistant to lamivudine but also replicates nucleic acids to lower levels in vitro at late time points in the recombinant baculovirus system when replication is driven primarily from CCC DNA.;Recombinant baculoviruses expressing the WT hepatitis B virus polymerase were utilized to determine if the WT polymerase could correct the defect in reverse transcription at late time points post-transduction of rtM204I. Expression of a functional WT polymerase was confirmed through the restoration of replication of a polymerase-minus HBV mutant. WT polymerase can indeed restore rtM204I replicative intermediates and extracellular DNA levels without affecting the level of covalently closed circular DNA. Analysis of the genetically marked viral genomes verified that this restoration resulted from trans-complementation, rather than recombination. Furthermore, WT polymerase can function in trans to complement viral replication regardless of whether the RNA packaging signal, epsilon, which is required to activate the polymerase, was provided in cis. In contrast, the enhanced levels of total HBV RI observed when HepG2 cells were cotransduced with baculoviruses expressing the WT and rtM204I genomes was not due to trans-complementation of rtM204I by the WT polymerase. The data indicate that HBV polymerase can function in trans, without the requirement of the epsilon RNA in cis, in either RNA packaging or DNA synthesis in vivo. WT polymerase also has the capacity to trans-complement the replication defect of the polymerase mutant rtM204I; however, trans-complementation may require polymerase over-expression from a packaging-defective RNA. In contrast, when expressed from an authentic pregenomic RNA, as in a mixed infection, polymerase may not trans-complement efficiently.;To continue the extensive analysis to identify where the block in replication of rtM204I occurs, the next step tested was RNA encapsidation. However, encapsidation has not been characterized in the HBV recombinant baculovirus system. Detectable levels of encapsidation by Southern blot first becomes visible approximately 10h post-transduction, with HBV SS DNA arising by 14h, RC/DS DNA by 24h, and EC DNA by 48h. Once encapsidation was characterized, WT and rtM204I levels of RNA encapsidation were measured. It is clear that the block in rtM204I replication does not occur at the level of RNA encapsidation, suggesting that the defect is either at the step of reverse transcription or DNA-to-DNA synthesis. Additionally, partial restoration of rtM204I replication by the WT polymerase construct, PCFE, does not cause an increase in RNA encapsidation compared to rtM204I alone, suggesting that more than one polymerase molecule may be packaged within a nucleocapsid, at least when excess WT polymerase is over-expressed from a packaging-defective RNA during trans-complementation of a drug-resistant mutant.;To begin to directly compare the function of the WT and rtM204I polymerases, the endogenous polymerase reaction was used. The rtM204I polymerase does not show increased activity when dNTP concentrations exceed 20microM, in contrast to a previous report. The rtM204I polymerase appears to be functionally hindered and unaffected by dNTP concentrations, although the effect of increasing dNTP concentrations in vivo still needs to be tested. (Abstract shortened by UMI.).
机译:本论文的初步研究集中在乙型肝炎病毒(HBV)的前核(PC)和耐拉米夫定的rtM204I突变体的复制上。在转导后的前五天,rtM204I突变体的复制水平与WT HBV相当,而以前的报道表明rtM204I突变体与WT HBV相比复制存在严重缺陷。但是,到转导后第10天,与野生型HBV相比,rtM204I的细胞内和细胞外HBV DNA水平明显降低。尽管rtM204I突变减少了HBV复制中间体的产生,但在较晚的时间点未观察到对共价闭合的环状DNA或HBV转录本水平的影响。用不同比例的WT和rtM204I杆状病毒进行的共转导研究表明,rtM204I不会产生抑制HBV复制的产物。但是,WT和rtM204I的结合在较晚的时间点产生的HBV DNA水平要高于单独的WT,这表明WT聚合酶可能反式发挥作用,促进rtM204I复制。总体而言,数据表明,rtM204I突变产生的聚合酶不仅对拉米夫定具有抗性,而且在重组杆状病毒系统中,当复制主要由CCC DNA驱动时,可以在体外在较晚的时间点将核酸复制至较低的水平;重组杆状病毒表达WT乙型肝炎病毒聚合酶的表达被用于确定WT聚合酶是否可以在rtM204I转导的较晚时间点纠正逆转录缺陷。通过恢复聚合酶减去HBV突变体的复制,可以确认功能性WT聚合酶的表达。 WT聚合酶确实可以恢复rtM204I复制中间体和细胞外DNA水平,而不会影响共价闭合的环状DNA的水平。对遗传标记的病毒基因组的分析证实,这种恢复是由反式互补而非重组引起的。此外,无论是否顺式提供了激活聚合酶所需的RNA包装信号ε,WT聚合酶都可以反式发挥功能以补充病毒复制。相反,当将HepG2细胞与表达WT和rtM204I基因组的杆状病毒共转导时,观察到总HBV RI的水平提高不是由于WT聚合酶对rtM204I的反式互补。数据表明,在体内RNA包装或DNA合成中,HBV聚合酶可以反式起作用,而无需顺式的εRNA。 WT聚合酶还具有反补聚合酶突变体rtM204I的复制缺陷的能力。但是,反式互补可能需要包装缺陷RNA聚合酶的过表达。相反,当从真实的前基因组RNA中表达时,如在混合感染中,聚合酶可能无法高效地进行反式互补。为了继续进行广泛的分析以鉴定rtM204I复制的阻滞发生在何处,测试的下一步是RNA衣壳化。但是,在HBV重组杆状病毒系统中没有衣壳化的特征。在转导后约10h,通过Southern blot检测到的衣壳化水平首先变得可见,其中HBV SS DNA发生在14h,RC / DS DNA发生在24h,EC DNA发生在48h。一旦鉴定了衣壳化,就测定了WT和rtM204I水平的RNA衣壳化。清楚的是,rtM204I复制中的阻滞不会在RNA衣壳化水平上发生,这表明该缺陷是在逆转录或DNA到DNA合成的步骤中进行的。此外,与单独的rtM204I相比,WT聚合酶构建体PCFE对rtM204I复制的部分恢复不会引起RNA衣壳化的增加,这表明至少在过量的WT聚合酶过量时,可以在核衣壳中包装一个以上的聚合酶分子。在耐药突变体的反式互补过程中从包装缺陷的RNA中表达。为了直接比较WT和rtM204I聚合酶的功能,使用了内源性聚合酶反应。与以前的报告相反,当dNTP浓度超过20 microM时,rtM204I聚合酶未显示活性增加。 rtM204I聚合酶似乎在功能上受dNTP浓度的影响,并且不受dNTP浓度的影响,尽管体内dNTP浓度增加的效果仍需测试。 (摘要由UMI缩短。)。

著录项

  • 作者单位

    The Pennsylvania State University.;

  • 授予单位 The Pennsylvania State University.;
  • 学科 Biology Microbiology.;Biology Virology.
  • 学位 Ph.D.
  • 年度 2009
  • 页码 341 p.
  • 总页数 341
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

  • 入库时间 2022-08-17 11:38:28

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