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Modeling the inheritance of time to onset.

机译:建模开始时间的继承。

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摘要

Working within a survival analysis framework, a model was developed to investigate genetic and environmental influences on the time to onset of developmental milestones and multifactorial threshold traits. Briefly, the accelerated failure time model, a regression model commonly used for the analysis of failure time data with measured covariates, was modified to include latent sources of genetic and environmental variation. The gamma distribution was chosen as the baseline distribution for this regression model since it provides a flexible density function over the positive range of values and is defined by parameters which are heuristically appealing.; For developmental milestones, both multifactorial and major locus gamma accelerated failure time models were considered. In each, a single latent aging effect, determined by genetic and, in the multifactorial case, environmental effects, was specified. For threshold traits, there were two sources of latent variation: an aging effect and an individual's inherited liability to the trait. It was shown that estimating the contribution of each of these sources to variation in the time to onset of threshold traits is a critical step in determining risks to relatives conditional upon a proband's age of onset.; Using simulated data sets of monozygotic and dizygotic twin pairs and nuclear families, maximum likelihood parameter estimation was carried out for the multifactorial and major locus models. For all models, several different orders of the gamma distribution were considered. Results indicate that the models are tractable, although the computing time required for the multifactorial threshold case may prohibit extensive hypotheses testing. In addition, the results suggest that the power to reject wrong gamma models and wrong genetic models depends upon the order of the true gamma process.; As an application of the multifactorial gamma accelerated failure time model, the age at menarche in 379 pairs of Australian twins was considered. Results indicate that there is substantial population heterogeneity in the latent aging variable, and 95% of this population variation is due to additive gene action.; Suggestions are made for future work in integrating survival analysis and quantitative genetic methods.
机译:在生存分析框架内工作,开发了一个模型以研究遗传和环境因素对发展里程碑和多因素阈值性状发作时间的影响。简而言之,对加速失效时间模型进行了修改,将加速失效时间模型(通常用于分析具有测量的协变量的失效时间数据的回归模型)包括遗传和环境变异的潜在来源。伽玛分布被选作该回归模型的基线分布,因为它在值的正范围内提供了灵活的密度函数,并由启发式吸引人的参数定义。对于发展里程碑,考虑了多因素和主要场所伽马加速故障时间模型。在每种情况下,都指定了由遗传决定的单一潜在衰老效应,在多因素情况下则由环境效应决定。对于阈值性状,潜在的变异有两个来源:衰老效应和个人对该性状的遗传责任。结果表明,估计每种来源对阈限性状发作时间变化的贡献是确定先证者发病年龄为条件的亲属风险的关键步骤。使用单卵双胎和双卵双胞胎对和核家族的模拟数据集,对多因子和主要基因座模型进行了最大似然参数估计。对于所有模型,都考虑了伽马分布的几个不同阶数。结果表明,该模型是易于处理的,尽管多因素阈值情况所需的计算时间可能会禁止进行广泛的假设检验。此外,结果表明拒绝错误的伽玛模型和错误的遗传模型的能力取决于真实伽玛过程的顺序。作为多因素伽马加速失败时间模型的一种应用,考虑了379对澳大利亚双胞胎的初潮年龄。结果表明,潜在衰老变量中存在显着的种群异质性,并且该种群变异的95%是由于加性基因作用引起的。提出了将生存分析与定量遗传方法相结合的未来工作的建议。

著录项

  • 作者

    Meyer, Joanne Marie.;

  • 作者单位

    Virginia Commonwealth University.;

  • 授予单位 Virginia Commonwealth University.;
  • 学科 Biology Genetics.
  • 学位 Ph.D.
  • 年度 1989
  • 页码 167 p.
  • 总页数 167
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 遗传学;
  • 关键词

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