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Effects of non-planar distortions in porphyrin compounds on their properties and functionality.

机译:卟啉化合物的非平面畸变对其性质和功能的影响。

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摘要

Porphyrins and related compounds are ubiquitous in nature, performing diverse functions including solar energy transduction, electron transport, molecular transport and storage, and catalysis. Due to their unique photophysical and chemical properties, they are excellent candidates for application as photosensitizers, catalysts, photocatalysts, molecular electronics and opto-electronics. Several properties of porphyrins are sensitive to small variations in their structure, and this dissertation investigates the effects of out-of-plane distortions of the macrocycle on optical properties, reactivity to axial ligands, and substituent rotation. The structure-functions relationships are examined using molecular simulations, UV-visible absorption spectroscopy, resonance Raman spectroscopy, and normal-coordinate structural decomposition (NSD) analysis of simulated and X-ray crystal structures.;Concerning the optical properties, the view that the large red shifts seen in the optical absorption bands of peripherally crowded nonplanar porphyrins are the result of nonplanar deformations of the macrocycle had been challenged in the literature by studies suggesting that the shifts arise from substituent-induced changes in the macrocycle bond lengths and bond angles, termed in-plane nuclear reorganization (IPNR). The origins of the red shifts were here studied computationally and spectroscopically in a series of nickel or zinc meso-tetraalkyl porphyrins with graded amounts of ruffling deformations, as well as a series of novel bridled nickel chiroporphyrins in which ruffling deformation is determined by bridle length while other substituent effects are minimal.;With the aim of investigating the utility of axial ligand binding to drive porphyrinic molecular devices, the effects of nonplanarity on the axial ligation properties of nickel porphyrins were studied using again a series of meso-tetraalkyl porphyrins. Increased porphyrin ruffling is spectroscopically found to cause a drastic decrease in the binding affinity for pyrrolidine and piperidine, such that the affinity is greatly lowered for the tetraalkyl porphyrins porphyrins with methyl or primary alkyl groups compared to nearly planar NiTPP, and ligand binding is nearly completely inhibited for those with secondary or tertiary alkyl groups (i.e., cyclohexyl, cyclopropyl, iso-propyl, or tert-butyl). Ligand binding energies obtained from molecular mechanics calculations were in agreement with the spectroscopic results, and MM calculations determined that the lowered affinity is the result of the cores of the sterically crowded porphyrins being unable to expand and flatten to accommodate the larger high-spin nickel(II) ion.;Porphyrins are an also an ideal platform for molecular rotors due to the versatility provided by the multiple substituent positions combined with their unique electronic and chemical properties potentially allowing several driving and switching mechanisms for rotation. Computer simulations were here used to explain the unusual experimentally observed rotational behavior of aryl substituents on porphyrins. Meso aryl rotational barriers might be expected to be much higher in dodecaaryl porphyrins than in tetraaryl porphyrins due to the great difference in peripheral crowding, and those NMR studies had found this indeed to be the case for the porphyrin dication (having four protons at the core). Suprisingly, however, small increases were found for the equivalent porphyrins with either nickel or zinc ions at the core. Previous studies of TArPs attributed variance in rotational barrier with core substituent to differing macrocycle nonplanar distortions caused by these substituents. However, it was shown here that the rotational barrier variance could not be accounted for merely by structural differences as observed in the static picture from x-ray crystal structures. Rather, molecular simulations showed that nonplanar deformability of the macrocycle, allowing substituents to move farther out-of-plane than their equilibrium positions, is important in lowering the activation energy for aryl-porphyrin rotation. Furthermore, uni-directional rotation, which is of technological interest since it is often considered a prerequisite for molecular motors, was demonstrated in a dodecaaryl porphyrin dication. This is likely the case for many other aryl-porphyrin rotors, particularly in similarly saddled structures. (Abstract shortened by UMI.)
机译:卟啉和相关化合物在自然界中无处不在,具有多种功能,包括太阳能转换,电子传输,分子传输和存储以及催化作用。由于其独特的光物理和化学特性,它们非常适合用作光敏剂,催化剂,光催化剂,分子电子学和光电学。卟啉的几种性质对其结构的微小变化敏感,因此本文研究了大环的平面外畸变对光学性质,对轴向配体的反应性和取代基旋转的影响。使用分子模拟,紫外可见吸收光谱,共振拉曼光谱以及模拟和X射线晶体结构的正坐标结构分解(NSD)分析来检查结构与功能之间的关系;关于光学特性,认为在外围拥挤的非平面卟啉的光吸收带中看到的大红移是大环的非平面形变的结果,该研究已在文献中受到研究的挑战,研究表明,该移位是由取代基引起的大环键长和键角的变化引起的,称为机内核重组(IPNR)。在这里,通过一系列光谱学和光谱学研究了红移的起源的一系列镍或锌的中四烷基卟啉,这些波纹具有渐变的数量的起伏变形,以及一系列新颖的桥联镍基卟啉,其中波纹起伏变形由bri的长度决定,而为了研究轴向配体结合作用以驱动卟啉分子装置的目的,再次使用一系列内消旋四烷基卟啉研究了非平面性对镍卟啉轴向连接性能的影响。光谱学上发现增加的卟啉波动导致与吡咯烷和哌啶的结合亲和力急剧降低,因此与具有近乎平面的NiTPP相比,具有甲基或伯烷基的四烷基卟啉卟啉的亲和力大大降低,并且配体结合几乎完全对于具有仲或叔烷基基团(即环己基,环丙基,异丙基或叔丁基)的化合物而言,其被抑制。从分子力学计算获得的配体结合能与光谱结果一致,并且MM计算确定降低的亲和力是由于空间拥挤的卟啉核无法扩展和变平而无法容纳较大的高自旋镍( II)离子卟啉也是分子转子的理想平台,因为多个取代基位置具有多功能性,再加上其独特的电子和化学性质,潜在地允许多种驱动和转换机制进行旋转。这里使用计算机模拟来解释卟啉上芳基取代基在实验中观察到的异常行为。由于周围拥挤的巨大差异,十二烷基芳基卟啉的中观芳基旋转势垒可能比四芳基卟啉高得多,并且那些NMR研究发现,卟啉指示确实是这种情况(核心有四个质子) )。然而,令人惊讶的是,对于以镍或锌离子为核心的等效卟啉,发现了很小的增加。 TArPs的先前研究将具有核心取代基的旋转势垒的差异归因于由这些取代基引起的不同大环非平面畸变。但是,这里显示出旋转势垒的变化不能仅由在静态图片中从X射线晶体结构观察到的结构差异来解释。而是,分子模拟显示,大环的非平面可变形性(使取代基比其平衡位置更远离平面移动)对于降低芳基卟啉旋转的活化能很重要。此外,十二烷基芳基卟啉指示剂证明了单向旋转技术的重要性,因为它通常被认为是分子电动机的先决条件。对于许多其他芳基-卟啉转子,尤其是在类似鞍形结构中,可能是这种情况。 (摘要由UMI缩短。)

著录项

  • 作者

    Haddad, Raid E.;

  • 作者单位

    The University of New Mexico.;

  • 授予单位 The University of New Mexico.;
  • 学科 Chemistry Biochemistry.;Engineering Chemical.
  • 学位 Ph.D.
  • 年度 2011
  • 页码 241 p.
  • 总页数 241
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

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