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Highly sensitive fiber-based devices for gene and protein analysis.

机译:基于高灵敏度纤维的设备,用于基因和蛋白质分析。

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摘要

Single cell probing has found a number of applications in different areas of research. It can help us to better understand cell-to-cell interactions; it has found numerous applications in immunology, cancer research, detection of pathogenic infections and genetic abnormalities. The single cell analysis is very important in stem cells research and development of cells. The main obstacle in the single cell analysis is the small amount of analyte that a single cell could provide. Another difficulty is connected to the cell-to-cell variability inside the uniform population due to the differences of single cells in size, activity, mitotic stage, and functions.;To overcome these problems several methods of single cell analysis including utilization of fluorescence and microfluidic platforms were developed. However, existing methods for cell isolation and analysis are laborious, costly, taking long time and often lack sensitivity, which is necessary for a single cell level probing. Therefore there is a need for novel high throughput and convenient experimental techniques for analysis of gene expression in individual cells. Fiber-based devices with high surface area that are modified with mRNA capturing element could be an attractive candidate for this purpose. We proposed to develop microfluidic electrospun fiber yarns based biosensors for applications in detection of small amounts of targeted analytes, such as mRNA material of a single cell or specific secondary antibodies molecules.;In order to achieve this goal of improving single cell analysis we produced highly sensitive microfiber probes for PCR analysis of mRNA present in concentrations corresponding to those in a single cell. The bundle of microfibers with high specific surface area was modified with oligo dT25 which specifically binds the poly-A tail of mRNA. Now that RNA is captured by the fiber, relative expression of β-actin by contractile and synthetic vascular smooth muscle cells, as well as by adult and neonatal myocytes, was used as a model to evaluate performance of the fiber-based devices for mRNA extraction. Application of fiber yarns as the mRNA isolation probes for PCR analysis improves usability during the sample collection and processing and allows for focused probing from a desired area.;The sensitivity of an enzyme-linked immunosorbent assay (ELISA) performed directly on the fiber-based devices was also evaluated. Electrospun fiber yarns were covalently coated with a model capture antibody and then used to evaluate presence of the specific secondary antibodies in solutions. The colorimetric ELISA procedure was performed with ABTS substrate to investigate sensitivity of prepared sensors in the ELISA application.;Overall, these fibers provide a new flexible platform for a number of analysis types that can considerably improve its convenience and availability for various applications. This approach is universal and could be utilized to develop fiber-based devices that could be potentially used in point-of-care devices and for forensic analysis.
机译:单细胞探测在不同的研究领域中发现了许多应用。它可以帮助我们更好地了解细胞间的相互作用;它在免疫学,癌症研究,病原体感染和遗传异常的检测中发现了许多应用。单细胞分析在干细胞研究和开发中非常重要。单细胞分析的主要障碍是单细胞可能提供的少量分析物。另一个困难是由于单个细胞的大小,活性,有丝分裂期和功能的差异而导致的均匀群体内部的细胞间变异性。为了克服这些问题,几种单细胞分析方法包括利用荧光和开发了微流体平台。然而,用于细胞分离和分析的现有方法费力,昂贵,花费时间长并且常常缺乏灵敏度,这对于单个细胞水平的探测是必需的。因此,需要新颖的高通量和方便的实验技术来分析单个细胞中的基因表达。为此,使用mRNA捕获元件修饰的具有高表面积的基于纤维的设备可能是有吸引力的候选对象。我们建议开发基于微流体电纺纤维纱的生物传感器,用于检测少量目标分析物,例如单细胞的mRNA材料或特定的第二抗体分子。为了实现改善单细胞分析的这一目标,我们生产了用于对mRNA进行PCR分析的高灵敏度超细纤维探针,其浓度与单个细胞中的浓度相对应。高比表面积的微纤维束被oligo dT25修饰,该dT25特异地结合了mRNA的poly-A尾部。现在,RNA被纤维捕获了,收缩和合成的血管平滑肌细胞以及成年和新生的肌细胞的β-肌动蛋白的相对表达被用作评估基于纤维的设备用于mRNA提取的性能的模型。 。将纤维纱用作用于PCR分析的mRNA分离探针可提高样品收集和处理过程中的可用性,并允许从所需区域进行集中探测;直接在基于纤维的纤维上进行酶联免疫吸附测定(ELISA)的灵敏度设备也进行了评估。用模型捕获抗体共价包裹静电纺丝纱线,然后将其用于评估溶液中特定二级抗体的存在。比色ELISA程序使用ABTS底物进行,以研究ELISA应用中制备的传感器的灵敏度。总体而言,这些纤维为许多分析类型提供了新的灵活平台,可以大大提高其在各种应用中的便利性和可用性。这种方法是通用的,可用于开发基于光纤的设备,这些设备可潜在地用于即时医疗设备和法医分析。

著录项

  • 作者

    Maximov, Victor.;

  • 作者单位

    Clemson University.;

  • 授予单位 Clemson University.;
  • 学科 Chemistry Biochemistry.;Engineering Biomedical.;Biophysics General.
  • 学位 Ph.D.
  • 年度 2013
  • 页码 167 p.
  • 总页数 167
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

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