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Parameter estimation and Stability of equilibrium of Gene Regulatory Network by Piecewise Multi-affine approach

机译:分段多仿射方法的基因调控网络参数估计和平衡稳定性

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摘要

In this paper, we developed a new method to estimate parameter area and analyze the stability of equilibrium for gene regulatory network by piecewise multi-affine (PMA) approach.For the PMA function, it is continuous and the thresholds of its partition the phase space into many subspace. In every subspace, the model can be transformed into linear model, so the stable and unstable manifolds of equilibrium points can be determined analytically and stability and bifurcation can be obtained easily and the corresponding parameter areas can be obtained. This method allows us to estimate and tune parameter for a kind of high dimensional gene network and analyze the dynamical behaviors of its. In the end, Repressilator model, as an example, illustrates the validity of the method in this paper.
机译:本文提出了一种新的方法来估计参数区域并通过分段多仿射(PMA)方法分析基因调控网络平衡的稳定性。对于PMA函数,它是连续的,并且其阈值划分相空间进入许多子空间在每个子空间中,可以将模型转换为线性模型,从而可以解析地确定平衡点的稳定和不稳定流形,并且可以轻松地获得稳定性和分叉性,并且可以获取相应的参数区域。这种方法使我们能够估计和调整一种高维基因网络的参数,并分析其动态行为。最后以Repressilator模型为例,说明了该方法的有效性。

著录项

  • 来源
  • 会议地点 Lijiang(CN);Lijiang(CN)
  • 作者单位

    Jianwei Shen@Department of Mathematics, Xuchang University, Xuchang 461000,China Institute of System Biology, Shanghai University, Shanghai 200444, China--Yi Wang@Institute of System Biology, Shanghai University, Shanghai 200444, China--Zengrong Liu@Institute of System Biology, Shanghai University, Shanghai 200444, China--Rongling Lang@School of Electronic and Information Engineering, Beijing University of Aeronautics and Astronautics, Beijing,100083, P. R. China--;

  • 会议组织
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 生物工程学(生物技术) ;
  • 关键词

    Stability; Gene Regulatory Network; Piecewise Multi-affine approach.;

    机译:稳定性;基因调控网络;分段多仿射方法。;

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