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Multi-organ Segmentation in Pelvic CT Images with CT-based Synthetic MRI

机译:基于CT的合成MRI骨盆CT图像中的多器官分割

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We propose a hybrid deep learning-based method, which includes a cycle consistent generative adversarial network(CycleGAN) and deep attention fully convolution network implemented by a U-Net (DAUnet), to perform volumetricmulti-organ segmentation for pelvic computed tomography (CT). The proposed method first utilized CycleGAN togenerate synthetic MRI (sMRI) to provide superior soft tissue contrast. Then, the proposed method fed the sMRI into theDAUnet to obtain the volumetric segmentation of bladder, prostate and rectum, simultaneously, via a multi-channeloutput. The deep attention strategy was introduced to retrieve the most relevant features to identify organ boundaries.Deep supervision was incorporated into the DAUnet to enhance the features’ discriminative ability. Segmented contoursof a patient were obtained by feeding the CT image into the trained CycleGAN to generate sMRI, which was then fed tothe trained DAUnet to generate the organ contours. A retrospective studied was performed with data sets from 45 patientswith prostate cancer. The Dice similarity coefficient and mean surface distance indices for bladder, prostate, and rectumcontours were 0.94, 0.47 mm; 0.86, 0.78 mm; and 0.89, 0.85 mm, respectively. The proposed network provides accurateand consistent prostate, bladder and rectum segmentation without the need of additional MRIs. With further evaluationand clinical implementation, this method has the potential to facilitate routine prostate-cancer radiotherapy treatmentplanning.
机译:我们提出了一种混合深层学习的方法,包括一个一致的生成对抗网络(Cypergan)和深受关注的完全卷积网络由U-Net(Daunet)实现,以执行体积盆腔计算机断层扫描(CT)的多器官分段。所提出的方法首先利用了Cycleangan产生合成MRI(SMRI)以提供优异的软组织对比。然后,所提出的方法将SMRI送入Daunet通过多通道同时获得膀胱,前列腺和直肠的容量分割输出。引入了深度关注策略来检索最相关的功能以识别器官边界。深度监督被纳入Daunet,以提高特征的辨别能力。分段轮廓通过将CT图像饲养到训练的CycregaN中以产生SMRI来获得患者,然后将其送入训练有素的Daunet生成器官轮廓。通过45名患者的数据集进行研究进行了回顾性随着前列腺癌。膀胱,前列腺和直肠的骰子相似系数和平均表面距离轮廓为0.94,0.47 mm; 0.86,0.78 mm;分别为0.89,0.85毫米。建议的网络提供了准确的和一致的前列腺,膀胱和直肠分割而不需要额外的MRI。进一步评估和临床实施,这种方法有可能促进常规前列腺癌放射治疗规划。

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