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CT-Realistic Lung Nodule Simulation from 3D Conditional Generative Adversarial Networks for Robust Lung Segmentation

机译:基于3D条件生成对抗网络的CT - 现实肺结节模拟鲁棒肺分割

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Data availability plays a critical role for the performance of deep learning systems. This challenge is especially acute within the medical image domain, particularly when pathologies are involved, due to two factors: (1) limited number of cases, and (2) large variations in location, scale, and appearance. In this work, we investigate whether augmenting a dataset with artificially generated lung nodules can improve the robustness of the progressive holistically nested network (P-HNN) model for pathological lung segmentation of CT scans. To achieve this goal, we develop a 3D generative adversarial network (GAN) that effectively learns lung nodule property distributions in 3D space. In order to embed the nodules within their background context, we condition the GAN based on a volume of interest whose central part containing the nodule has been erased. To further improve realism and blending with the background, we propose a novel multi-mask reconstruction loss. We train our method on over 1000 nodules from the LIDC dataset. Qualitative results demonstrate the effectiveness of our method compared to the state-of-art. We then use our GAN to generate simulated training images where nodules lie on the lung border, which are cases where the published P-HNN model struggles. Qualitative and quantitative results demonstrate that armed with these simulated images, the P-HNN model learns to better segment lung regions under these challenging situations. As a result, our system provides a promising means to help overcome the data paucity that commonly afflicts medical imaging.
机译:数据可用性对深度学习系统的性能起着关键作用。这种挑战在医学图像领域尤其急剧,特别是当涉及病理时,由于两个因素:(1)有限数量的病例,(2)位置,规模和外观的大变化。在这项工作中,我们调查了是否与人工生成的肺结节增强数据集可以提高CT扫描的病理肺分割的逐步全巢网络(P-HNN)模型的鲁棒性。为了实现这一目标,我们开发了一种3D生成的对抗性网络(GAN),有效地学习3D空间中的肺结核属性分布。为了在其背景上的背景下嵌入结节,我们将基于含有结节的中央部分被擦除的兴趣体积来调节GaN。为了进一步改善现实主义和与背景混合,我们提出了一种新的多掩模重建损失。我们从LIDC数据集中培训我们的方法超过1000个结节。定性结果证明了与最先进的方法的有效性。然后,我们使用我们的GaN生成模拟训练图像,结节躺在肺部边界,这是公布的P-HNN模型斗争的情况。定性和定量结果表明,使用这些模拟图像,P-HNN模型在这些具有挑战性的情况下向更好的肺部区域学习。因此,我们的系统提供了有希望的意义,有助于克服通常折磨医学成像的数据缺乏。

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